CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g23110

Gene name -

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At2g23110 816843 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.91 95.6 At5g42290 834234 transcription activator-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO S.X. H.G.
0.89 94.6 At2g28420 817390 lactoylglutathione lyase family protein / glyoxalase I family protein F:lactoylglutathione lyase activity;P:carbohydrate metabolic process;C:cellular_component unknown;BOPMFA S.X. H.G.
0.88 94.0 At4g27530 828862 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.85 92.4 At1g02700 839492 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PMFO S.X. H.G.
0.83 91.4 At1g27990 839692 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.83 91.4 At3g58450 825014 universal stress protein (USP) family protein F:molecular_function unknown;P:response to stress;C:cellular_component unknown;BPAOFM S.X. H.G.
0.83 91.4 At1g72100 843541 late embryogenesis abundant domain-containing protein / LEA domain-containing protein F:unknown;P:embryonic development ending in seed dormancy;C:endomembrane system;BPOMFAV S.X. H.G.
0.80 89.8 At4g21020 827849 late embryogenesis abundant domain-containing protein / LEA domain-containing protein F:unknown;P:embryonic development ending in seed dormancy;C:unknown;OMBPFVA S.X. H.G.
0.80 89.8 At3g22500 821821 ATECP31 late embryogenesis abundant (LEA) protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
664.6 100.0 GSM133303 RIKEN-NAKABAYASHI1A GSE5700 AtGenExpress: Effect of ABA during seed imbibition
344.1 100.0 GSM131706 ATGE_84_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
334.2 100.0 GSM131708 ATGE_84_D GSE5634 AtGenExpress: Developmental series (siliques and seeds)
310.0 100.0 GSM131707 ATGE_84_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
252.6 100.0 GSM131700 ATGE_82_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
249.0 100.0 GSM131701 ATGE_82_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
244.3 100.0 GSM133304 RIKEN-NAKABAYASHI1B GSE5700 AtGenExpress: Effect of ABA during seed imbibition
218.1 100.0 GSM131702 ATGE_82_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
180.6 100.0 GSM131703 ATGE_83_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
149.5 99.9 GSM131705 ATGE_83_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.31 6e-10 63 At2g23120 816844 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P C.G. S.X.
0.04 8e-3 40 At2g33440 817909 splicing factor family protein F:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:cellular_component unknown;MPFO C.G. S.X.
0.07 3e-2 38 At3g01740 821088 - F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFO C.G. S.X.
0.01 1e-1 36 At4g24800 828582 MA3 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF C.G. S.X.
0.06 1e-1 36 At1g21925 5007714 - Encodes a Plant thionin family protein C.G. S.X.
0.06 1e-1 36 At1g21928 5007715 - Encodes a Plant thionin family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 7e-1 34 Glycine max PsAffx.CL1680Contig1_at PsAffx.CL1680Contig1 - - 2e+0 At2g23110 - C.G. S.X.
0.04 1e+0 32 Hordeum vulgare Contig24078_at Contig24078 - - 4e+0 At3g27080 TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3) C.G. S.X.
0.03 1e+0 34 Oryza sativa Os10g0521600 AK065223.1 - The start codon is not identified. 2e-2 At5g07270 ankyrin repeat family protein C.G. S.X.
0.04 3e+0 32 Populus trichocarpa PtpAffx.68969.1.A1_at CV276350 - - 2e-11 At2g47110 UBQ6 C.G. S.X.
0.05 5e-1 34 Triticum aestivum Ta.14111.2.S1_at CA712539 - - 3e-1 At4g32850 nPAP (NUCLEAR POLY(A) POLYMERASE) C.G. S.X.
0.07 1e+1 28 Vitis vinifera 1622618_at CF414579 hypothetical protein LOC100255769 - 1e-1 At5g35475 - C.G. S.X.
0.03 4e+0 30 Zea mays Zm.10253.1.A1_at BM381237 AN18 - 2e+1 At5g18800 NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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