CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g22880

Gene name VQ motif-containing protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.53 68.6 At2g22880 816819 VQ motif-containing protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P S.X. H.G.
0.40 50.8 At4g21390 827891 B120 F:protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, recognition of pollen;C:plasma membrane;MPOBFVA S.X. H.G.
0.22 17.5 At1g76070 843939 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PF S.X. H.G.
0.22 17.5 At5g61560 836277 protein kinase family protein F:in 6 functions;P:protein amino acid phosphorylation, protein ubiquitination;C:chloroplast, plasma membrane;MPOBFVA S.X. H.G.
0.13 5.8 At3g59700 825139 ATHLECRK (ARABIDOPSIS THALIANA LECTIN-RECEPTOR KINASE) member of Receptor kinase-like protein family S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
131.8 99.9 E-MEXP-807-raw-cel-1173272948
79.3 99.9 E-MEXP-1443-raw-cel-1581869863
75.9 99.9 GSM39197 RRE1_Chitin3 GSE2169 rre1 and rre2 mutants
73.9 99.9 GSM142830 GM001_ATH1_A14-Torres-4N3_repeat2 GSE6176 Impact of Type III effectors on plant defense responses
73.9 99.9 GSM13783 Dexamethasone plus cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
73.1 99.9 E-MEXP-807-raw-cel-1173273144
72.1 99.9 GSM39196 RRE1_Chitin2 GSE2169 rre1 and rre2 mutants
70.7 99.9 E-MEXP-1094-raw-cel-1379507313
67.5 99.8 E-MEXP-807-raw-cel-1173273116
64.0 99.8 GSM39198 RRE1_Chitin4 GSE2169 rre1 and rre2 mutants
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Homologous genes

Paralogous genes

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HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.17 4e-8 57 At4g37710 829927 VQ motif-containing protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P C.G. S.X.
0.02 4e-2 38 At2g31820 817739 ankyrin repeat family protein F:protein binding;P:unknown;C:plasma membrane;MOFBPVA C.G. S.X.
0.03 6e-1 34 At4g11410 826745 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPA C.G. S.X.
0.01 6e-1 34 At1g58410 842210 disease resistance protein (CC-NBS-LRR class), putative F:protein binding, ATP binding;P:defense response, apoptosis;C:cellular_component unknown;PMBOFA C.G. S.X.
0.01 3e+0 32 At5g18750 831993 DNAJ heat shock N-terminal domain-containing protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMPFAV C.G. S.X.
0.02 3e+0 32 At5g49200 834979 WD-40 repeat family protein / zfwd4 protein (ZFWD4) F:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:unknown;MFOBPA C.G. S.X.
0.01 3e+0 32 At5g54280 835516 ATM2 (ARABIDOPSIS THALIANA MYOSIN 2) Type VII myosin gene C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e+0 32 Glycine max Gma.12769.1.A1_at CD397113 - - 3e+0 At2g19630 F-box family protein C.G. S.X.
0.04 1e+0 32 Hordeum vulgare Contig19320_at Contig19320 - - 9e-1 At1g06475 unknown protein C.G. S.X.
0.02 3e-1 36 Oryza sativa Os01g0972800 AY341842.1 - WRKY transcription factor 44 2e-7 At5g43290 WRKY49 C.G. S.X.
0.03 4e+0 32 Populus trichocarpa PtpAffx.91697.1.S1_at BU884527 hypothetical protein - 8e-11 At4g29010 AIM1 (ABNORMAL INFLORESCENCE MERISTEM) C.G. S.X.
0.04 3e+0 32 Triticum aestivum Ta.7820.2.S1_at CA744145 - - 4e+0 At2g31082 CLE7 (CLAVATA3/ESR-RELATED 7) C.G. S.X.
0.04 8e-1 32 Vitis vinifera 1615856_at CB349636 - - 2e-1 At1g19730 ATTRX4 C.G. S.X.
0.04 3e-1 34 Zea mays Zm.1812.1.A1_at BG840771 hypothetical protein LOC100272683 - 1e+0 At2g22880 VQ motif-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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