Gene omics information

Query gene ID At2g22760
Gene name basic helix-loop-helix (bHLH) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6176.7At2g22760816806basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFOMAS.X.H.G.
1.00100.0At5g52050835280MATE efflux protein-relatedF:drug transporter activity, antiporter activity;P:multidrug transport;C:membrane;BOPFAMS.X.H.G.
0.8089.8At2g27310817274F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6781.6At5g42380834244CML37 (CALMODULIN LIKE 37)F:calcium ion binding;P:response to ozone;C:chloroplast;MPOFBVS.X.H.G.
0.6075.7At2g32140817773transmembrane receptorF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane, chloroplast;PBOS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
763.0100.0E-MEXP-807-raw-cel-1173273252
639.1100.0E-MEXP-807-raw-cel-1173273170
484.8100.0E-MEXP-807-raw-cel-1173273144
469.2100.0E-MEXP-807-raw-cel-1173273060
406.8100.0E-MEXP-807-raw-cel-1173273116
358.8100.0E-MEXP-807-raw-cel-1173273223
319.9100.0E-MEXP-807-raw-cel-1173273196
285.1100.0E-MEXP-807-raw-cel-1173273088
121.699.9GSM184897Arabidopsis, root cells, cortex, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
111.099.9GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.021e-138At2g27505817296-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.024e-136At5g53420835423-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.024e-136At5g14090831258unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.024e-136At4g27900828903-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.014e-136At3g51310824294VPS35C (VPS35 HOMOLOG C)Homolog of yeast retromer subunit VPS35. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.C.G.S.X.
0.012e+034At5g17270831592tetratricopeptide repeat (TPR)-containing proteinF:binding;P:biological_process unknown;C:cellular_component unknown;OBMAFPC.G.S.X.
0.012e+034At5g49760835039leucine-rich repeat family protein / protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, vacuole;MPOBFVAC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Glycine maxGma.15770.1.A1_atCD407942--6e-20At5g26110ATP binding / catalytic/ protein kinaseC.G.S.X.
0.033e+032Hordeum vulgareHA06j10r_atHA06j10r--2e+0At4g21920unknown proteinC.G.S.X.
0.029e-136Oryza sativaOsAffx.18071.1.S1_at---0C.G.S.X.
0.036e-446Populus trichocarpaPtpAffx.9579.1.S1_atDN487886hypothetical protein-3e-2At4g37850basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.035e-136Triticum aestivumTa.14757.1.S1_atCA681525--4e+0At2g29400TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1)C.G.S.X.
0.032e+032Vitis vinifera1614981_atCB345134--9e-1At3g08000RNA-binding protein, putativeC.G.S.X.
0.023e+032Zea maysZm.5851.6.S1_x_atL46399.1MADS box protein-2e-8At4g18960AG (AGAMOUS)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage