Gene omics information

Query gene ID At2g22750
Gene name basic helix-loop-helix (bHLH) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7989.1At2g22750816805basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOS.X.H.G.
0.6781.6At4g23090828408unknown proteinF:molecular_function unknown;P:unknown;C:cellular_component unknown;PS.X.H.G.
0.6478.9At1g55790842028ATP binding / nucleotide binding / phenylalanine-tRNA ligaseF:phenylalanine-tRNA ligase activity, nucleotide binding, ATP binding;P:phenylalanyl-tRNA aminoacylation, translation;C:cytoplasm;PFMOBS.X.H.G.
0.6277.3At2g20660816594RALFL14 (ralf-like 14)Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.S.X.H.G.
0.6277.3At5g16430831504-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5974.7At3g553003769718transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5673.0At1g74480843789RWP-RK domain-containing proteinF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;POFMS.X.H.G.
0.5469.5At3g14490820672terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;POS.X.H.G.
0.5469.5At4g39756830133kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOAVS.X.H.G.
0.5469.5At1g65120842819ubiquitin carboxyl-terminal hydrolase-relatedF:ubiquitin thiolesterase activity, zinc ion binding;P:ubiquitin-dependent protein catabolic process;C:intracellular;OPMFBVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
538.8100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
471.1100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
353.0100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
342.8100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
338.7100.0GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
313.2100.0GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
303.1100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
286.7100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
215.3100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
193.6100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.289e-61234At4g37850829941basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOBC.G.S.X.
0.013e-240At5g19400832060SMG7F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOC.G.S.X.
0.023e-240At5g11730831045unknown proteinF:unknown;P:biological_process unknown;C:unknown;POBC.G.S.X.
0.033e-240At2g11910815665unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast envelope;BMOFPVAC.G.S.X.
0.021e-138At4g29230829044anac075 (Arabidopsis NAC domain containing protein 75)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PMOFBVC.G.S.X.
0.021e-138At3g26030822200ATB' DELTAprotein phosphatase 2A regulatory subunit isoform B' deltaC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-240Glycine maxGmaAffx.64788.1.S1_atBF426122--2e-7At4g17880basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.032e-136Hordeum vulgarerbags24a10_atrbags24a10--2e+1At5g5924040S ribosomal protein S8 (RPS8B)C.G.S.X.
0.039e-136Oryza sativaOs08g01262009636.m00237--2e-4At3g50550unknown proteinC.G.S.X.
0.145e-1479Populus trichocarpaPtpAffx.204763.1.S1_atpmrna9379hypothetical protein-2e-14At2g22750basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.032e+034Triticum aestivumTaAffx.5719.1.S1_atCA701033--6e-1At1g24880UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylaseC.G.S.X.
0.035e-134Vitis vinifera1606773_atCF208569hypothetical protein LOC100243052-1e-18At3g54300ATVAMP727 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 727)C.G.S.X.
0.022e-136Zea maysZm.11746.1.A1_atBM380405--1e-23At5g50310kelch repeat-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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