Gene omics information

Query gene ID At2g22470
Gene name AGP2 (ARABINOGALACTAN PROTEIN 2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g22470816779AGP2 (ARABINOGALACTAN PROTEIN 2)Encodes arabinogalactan-protein (AGP2).S.X.H.G.
0.8693.1At5g10830830950embryo-abundant protein-relatedF:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOAS.X.H.G.
0.3338.1At3g44190823541pyridine nucleotide-disulphide oxidoreductase family proteinF:electron carrier activity, oxidoreductase activity, FAD binding;P:unknown;C:unknown;BOFAMPS.X.H.G.
0.3338.1At5g12880831128proline-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.082.3At4g13660827000PRR2 (PINORESINOL REDUCTASE 2)Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows preference for pinoresinol and not lariciresinol.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
161.699.9GSM184913Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
151.299.9GSM226537L7SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
100.999.9GSM226540L10SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
90.499.9GSM226539L9SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
81.899.9GSM184911Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
81.199.9GSM226538L8SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
65.699.8GSM184910Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
65.299.8GSM184914Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
61.899.8GSM184482Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
54.099.8GSM133808Diamond_A-1-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.228e-754At4g40090830172AGP3 (arabinogalactan-protein 3)F:unknown;P:multicellular organismal development;C:endomembrane system;PC.G.S.X.
0.023e-342At2g19090816426unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PMOFBVC.G.S.X.
0.022e-136At4g16600827361transferase, transferring glycosyl groups / transferase, transferring hexosyl groupsF:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process, biosynthetic process;C:endomembrane system;PMFOBVC.G.S.X.
0.028e-134At5g51795835254Kin17 DNA-binding protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBC.G.S.X.
0.038e-134At4g31370829264FLA5 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 PRECURSOR)fasciclin-like arabinogalactan-protein, putative (FLA5)C.G.S.X.
0.018e-134At3g59140825083ATMRP14member of MRP subfamilyC.G.S.X.
0.028e-134At2g05360815084-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.018e-134At2g33050817867AtRLP26 (Receptor Like Protein 26)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVC.G.S.X.
0.028e-134At2g17480816254MLO8 (MILDEW RESISTANCE LOCUS O 8)A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO8 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledons and hypocotyl, and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+034Glycine maxPsAffx.C13000092_atPsAffx.C13000092--2e-1At4g09610GASA2 (GAST1 PROTEIN HOMOLOG 2)C.G.S.X.
0.042e+032Hordeum vulgareContig24099_atContig24099--5e+0At4g28060cytochrome c oxidase subunit 6b, putativeC.G.S.X.
0.044e-136Oryza sativaOsAffx.7236.1.S1_at---0C.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.220271.1.S1_atpmrna36639hypothetical protein-7e-1At2g22470AGP2 (ARABINOGALACTAN PROTEIN 2)C.G.S.X.
0.052e-136Triticum aestivumTaAffx.107671.1.S1_atCA696856--2e-1At2g22470AGP2 (ARABINOGALACTAN PROTEIN 2)C.G.S.X.
0.054e+030Vitis vinifera1616373_atCA818577--7e+0At5g07000ST2B (SULFOTRANSFERASE 2B)C.G.S.X.
0.035e+030Zea maysZm.8849.1.A1_atBM351262--1e+0At1g48500JAZ4 (JASMONATE-ZIM-DOMAIN PROTEIN 4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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