CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g22430

Gene name ATHB6

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At2g22430 816775 ATHB6 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis. S.X. H.G.
0.51 66.3 At3g56050 824771 protein kinase family protein F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;PMOBFVA S.X. H.G.
0.49 63.5 At5g01750 831684 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PF S.X. H.G.
0.47 61.2 At4g38460 830002 GGR (geranylgeranyl reductase) F:farnesyltranstransferase activity;P:isoprenoid biosynthetic process;C:chloroplast;BOPAMFV S.X. H.G.
0.44 57.2 At4g22260 828321 IM (IMMUTANS) Similar to mitochondrial alternative oxidase. im mutants have a variegated phenotype and fail to differentiate chloroplasts in the majority of their cells under high light intensity continuous illumination. The white tissues of immutans accumulate phytoene, a non-colored C40 carotenoid intermediate. This suggests that immutans controls, either directly or indirectly, the activity of phytoene desaturase (PDS), the enzyme that converts phytoene to zeta-carotene in higher plants. However, im is not the structural gene for PDS. It is located in the lumenar face of the thylakoid membrane. IM is expressed ubiquitously in plant tissues. S.X. H.G.
0.40 50.8 At1g65960 842908 GAD2 (GLUTAMATE DECARBOXYLASE 2) glutamate decarboxylase (GAD2) S.X. H.G.
0.39 48.4 At5g60360 836158 AALP (Arabidopsis aleurain-like protease) Encodes a senescence-associated thiol protease. S.X. H.G.
0.39 48.4 At4g02340 828063 epoxide hydrolase, putative F:epoxide hydrolase activity, catalytic activity;P:unknown;C:peroxisome;BOMFPAV S.X. H.G.
0.37 45.0 At1g31940 840084 unknown protein F:unknown;P:unknown;C:plasma membrane;P S.X. H.G.
0.37 45.0 At1g19660 838553 wound-responsive family protein F:unknown;P:response to wounding;C:unknown;BOPA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
14.9 99.4 GSM131539 ATGE_25_C GSE5630 AtGenExpress: Developmental series (leaves)
12.3 99.3 E-MEXP-98-raw-cel-320188804
10.8 99.2 GSM131537 ATGE_25_A GSE5630 AtGenExpress: Developmental series (leaves)
10.6 99.2 GSM128665 Underwood_1-17_Cor-hrpS-5x10e7-10h_Rep2_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
9.9 99.1 GSM128667 Underwood_1-20_Mock-Inoculum-10h_Rep2_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
9.3 99.1 E-MEXP-98-raw-cel-320189024
9.3 99.1 E-MEXP-1454-raw-cel-1585858071
8.8 99.0 E-MEXP-98-raw-cel-320188859
8.6 99.0 GSM131538 ATGE_25_B GSE5630 AtGenExpress: Developmental series (leaves)
8.3 99.0 E-MEXP-1474-raw-cel-1593932737
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.43 4e-63 242 At4g40060 830169 ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. C.G. S.X.
0.15 4e-17 89 At5g65310 836656 ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5) Encodes a class I HDZip (homeodomain-leucine zipper) protein that is a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment. C.G. S.X.
0.06 5e-10 65 At4g36740 829827 ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. C.G. S.X.
0.07 2e-6 54 At3g01470 821138 ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development. C.G. S.X.
0.05 3e-5 50 At2g18550 816370 HB-2 (HOMEOBOX-2) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. C.G. S.X.
0.05 5e-4 46 At1g69780 843314 ATHB13 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. C.G. S.X.
0.02 3e-2 40 At5g06290 830517 2-Cys Prx B (2-Cysteine peroxiredoxin B) Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues. C.G. S.X.
0.01 1e-1 38 At5g06940 830585 leucine-rich repeat family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 3e-6 54 Glycine max Gma.6451.1.S1_at AF184277.2 homeodomain-leucine zipper protein 56 - 3e-6 At2g22430 ATHB6 C.G. S.X.
0.03 2e-1 36 Hordeum vulgare Contig17801_at Contig17801 - - 1e+0 At4g36620 zinc finger (GATA type) family protein C.G. S.X.
0.03 9e-1 36 Oryza sativa OsAffx.547.1.S1_at - - - 0 C.G. S.X.
0.18 7e-10 65 Populus trichocarpa PtpAffx.4806.3.S1_a_at BU893906 hypothetical protein - 4e-10 At2g22430 ATHB6 C.G. S.X.
0.03 2e+0 34 Triticum aestivum TaAffx.52063.1.S1_at CA713823 - - 8e-3 At2g42190 unknown protein C.G. S.X.
0.11 4e-5 48 Vitis vinifera 1613887_at CF511099 - - 7e-8 At5g15150 ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3) C.G. S.X.
0.02 2e-1 36 Zea mays Zm.1140.1.S1_at BM073428 hypothetical protein LOC100279272 - 4e-14 At3g49670 BAM2 (BARELY ANY MERISTEM 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009414 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
X GO:0045941 Any process that activates or increases the frequency, rate or extent of transcription.
X GO:0009788 Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by abscisic acid.
S GO:0009738 A series of molecular signals mediated by the detection of abscisic acid.
C GO:0006355 Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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