Gene omics information

Query gene ID At2g21820
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6882.2At2g21820816718unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9195.6At5g42290834234transcription activator-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.8994.6At5g22470832308NAD+ ADP-ribosyltransferaseF:NAD+ ADP-ribosyltransferase activity;P:protein amino acid ADP-ribosylation;C:intracellular, nucleus;MOPFBVS.X.H.G.
0.8693.1At1g02700839492unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PMFOS.X.H.G.
0.8693.1At3g11050820276ATFER2 (ferritin 2)F:oxidoreductase activity, ferric iron binding, binding, transition metal ion binding;P:response to oxidative stress, cellular iron ion homeostasis, response to abscisic acid stimulus, iron ion transport;C:chloroplast;MBPOAFS.X.H.G.
0.8693.1At3g58450825014universal stress protein (USP) family proteinF:molecular_function unknown;P:response to stress;C:cellular_component unknown;BPAOFMS.X.H.G.
0.8491.9At3g12960820482unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8491.9At3g51810824344EM1 (LATE EMBRYOGENESIS ABUNDANT 1)Encodes a ABA-inducible protein that accumulates during seed maturation, in parallel with its corresponding mRNA but with a 3 d delay. During germination, AtEm1 protein undergoes two successive cleavages before being degraded. Both proteins are more stable than the corresponding mRNA. The gene can be activated by the basic leucine zipper transcription factor ABI5. Expressed predominantly in provascular tissues with the strongest expression in the root tip.S.X.H.G.
0.8089.8At1g27990839692unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8089.8At4g09600826545GASA3 (GAST1 PROTEIN HOMOLOG 3)One of GASA gene family which is related to a GA-stimulated transcript (GAST) from tomato.S.X.H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
282.0100.0GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
275.2100.0GSM10454WT Post-Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
235.1100.0GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
232.7100.0GSM10456WT Post-Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
222.4100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
216.6100.0GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
214.8100.0GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
207.4100.0GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
201.8100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
196.6100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.014e-134At4g04920825831SFR6 (SENSITIVE TO FREEZING 6)Encodes a nuclear targeted protein that plays a role in the CBF pathway -downstream of CBF translation. Mutants have impaired cold responses, reduced levels of cold induced RNA transcripts, are sensitive to osmotic stress.C.G.S.X.
0.014e-134At1g51570841582C2 domain-containing proteinF:unknown;P:tryptophan biosynthetic process;C:endoplasmic reticulum, cell wall;MPOFC.G.S.X.
0.022e+032At5g23690832434polynucleotide adenylyltransferase family proteinF:RNA binding, nucleotidyltransferase activity;P:RNA processing;C:unknown;BOFMPVAC.G.S.X.
0.012e+032At5g07650830658formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:chloroplast;MOPFBAC.G.S.X.
0.022e+032At5g34870833422zinc knuckle (CCHC-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:unknown;POC.G.S.X.
0.022e+032At4g24160828516hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:unknown;BOMFPAC.G.S.X.
0.032e+032At4g39740830129electron transport SCO1/SenC family proteinF:molecular_function unknown;P:unknown;C:unknown;BOMFPAC.G.S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.236e-444Glycine maxGma.8539.1.S1_atAF169025.1seed maturation protein PM41-1e-3At2g21820unknown proteinC.G.S.X.
0.072e-134Hordeum vulgareHVSMEi0008A06f2_s_atHVSMEi0008A06f2--9e-1At2g21820unknown proteinC.G.S.X.
0.073e+032Oryza sativaOs02g01593009630.m00575--7e-9At1g15270-C.G.S.X.
0.076e-444Populus trichocarpaPtpAffx.207818.1.S1_atpmrna15535hypothetical protein-3e-5At3g12685-C.G.S.X.
0.047e+030Triticum aestivumTaAffx.44371.1.A1_atCK211229--5e+0At3g62560GTP-binding protein, putativeC.G.S.X.
0.045e-132Vitis vinifera1622341_atCB978009hypothetical protein LOC100243509-5e-21At5g52210ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)C.G.S.X.
0.032e-134Zea maysZm.2015.1.A1_atAY104789.1--6e-3At2g41905unknown proteinC.G.S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage