Gene omics information

Query gene ID At2g21780
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g21780816714unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2115.8At5g28930833018transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.1710.2At2g13430815829unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.1710.2At4g11870826794unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBFMAPS.X.H.G.
0.157.8At1g06140837123pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFS.X.H.G.
0.124.9At3g30810822839transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.103.4At2g076603767968transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.092.8At3g50250824187unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.071.9At5g46440834687-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.071.9At5g287003770831transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1525.9100.0GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
271.4100.0GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
213.4100.0GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
189.2100.0GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
161.099.9GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
160.299.9GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
104.999.9GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
90.299.9GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
72.699.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
67.999.9GSM133766Lindsey_1-18_torpedo-root_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.282e-446At4g39360830091unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.021e-240At5g66560836788phototropic-responsive NPH3 family proteinF:protein binding, signal transducer activity;P:response to light stimulus;C:plasma membrane;PFBMOC.G.S.X.
0.034e-238At5g08590830760SNRK2.1 (SNF1-RELATED PROTEIN KINASE 2.1)Encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Similar to the calcium/calmodulin-dependent protein kinase subfamily and the SNF1 kinase subfamily.C.G.S.X.
0.032e-136At5g23680832433sterile alpha motif (SAM) domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBFVC.G.S.X.
0.032e-136At5g62380836359ANAC101 (ARABIDOPSIS NAC-DOMAIN PROTEIN 101)Encodes a NAC-domain transcription factor involved in xylem formation. Induces transdifferentiation of various cells into metaxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids.C.G.S.X.
0.012e-136At5g01690830460ATCHX27member of Putative Na+/H+ antiporter familyC.G.S.X.
0.012e-136At5g25590832634-F:unknown;P:N-terminal protein myristoylation;C:unknown;MOFPBVAC.G.S.X.
0.032e-136At5g47090834755unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVBAC.G.S.X.
0.042e-136At5g52200835296unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.072e-446Glycine maxGma.4901.2.S1_atBF071542--2e-4At2g21780unknown proteinC.G.S.X.
0.053e-134Hordeum vulgareHD08A04r_atHD08A04r--5e-2At3g59870unknown proteinC.G.S.X.
0.032e-240Oryza sativaOs12g06072009640.m04054--4e-2At2g21780unknown proteinC.G.S.X.
0.046e-238Populus trichocarpaPtp.1554.1.S1_atCK110137nbs-lrr resistance protein-8e-2At2g21780unknown proteinC.G.S.X.
0.062e-136Triticum aestivumTaAffx.5357.1.S1_atCA713422--5e-1At2g23320WRKY15C.G.S.X.
0.052e-134Vitis vinifera1608560_atCF405443hypothetical protein LOC100250989-3e+0At3g09890ankyrin repeat family proteinC.G.S.X.
0.043e-134Zea maysZmAffx.783.1.S1_atAI745854--8e-7At1g51730RWD domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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