Gene omics information

Query gene ID At2g21640
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5873.8At2g21640816702-Encodes a protein of unknown function that is a marker for oxidative stress response.S.X.H.G.
0.8693.1At2g04050814939MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAS.X.H.G.
0.7788.0At1g32350840127AOX1D (alternative oxidase 1D)F:alternative oxidase activity;P:oxidation reduction, response to cyclopentenone;C:mitochondrial envelope, mitochondrion;OPFBMS.X.H.G.
0.6075.7At1g74870843826protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:unknown;C:unknown;MFPOBS.X.H.G.
0.5873.8At2g04070814943antiporter/ drug transporter/ transporterF:antiporter activity, drug transporter activity, transporter activity;P:transport, multidrug transport;C:membrane;BOPFMAS.X.H.G.
0.5673.0At3g48850824046mitochondrial phosphate transporter, putativeF:binding;P:transport;C:mitochondrial inner membrane, chloroplast, membrane;MFPOS.X.H.G.
0.5368.6At5g434508343652-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to ACC oxidaseS.X.H.G.
0.5267.4At1g05680837075UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOFS.X.H.G.
0.5267.4At2g41730818772unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.5166.3At2g20720816600pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
180.4100.0E-MEXP-807-raw-cel-1173272948
170.1100.0GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
158.599.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
137.099.9GSM253200Nontransgenic(ga1-3rgargl2)-DEX-REP2GSE10019Identification of RGA downstream genes by using steroid-inducible system
119.599.9GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
111.999.9GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
100.999.9GSM253199Nontransgenic(ga1-3rgargl2)-DEX-REP1GSE10019Identification of RGA downstream genes by using steroid-inducible system
77.799.9GSM131400AtGen_6-7412_UV-Bstress-Shoots-6.0h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)
75.999.9GSM134421St.Clair_1-118_348_Van-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0
75.699.9GSM131399AtGen_6-7411_UV-Bstress-Shoots-6.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.413e-1581At4g39235830079unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.252e-652At3g05570819723unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.016e-134At5g53020835381unknown proteinF:unknown;P:biological_process unknown;C:unknown;MOBFPAVC.G.S.X.
0.026e-134At5g62550836375unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OMBFPVAC.G.S.X.
0.046e-134At4g02430828027pre-mRNA splicing factor, putative / SR1 protein, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBAC.G.S.X.
0.026e-134At4g00110828145GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3)Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.C.G.S.X.
0.036e-134At4g09870826576F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.125e-238Glycine maxGmaAffx.92571.1.A1_atCF808296--2e-5At3g05570unknown proteinC.G.S.X.
0.065e+030Hordeum vulgareHT11K16u_s_atHT11K16u--9e-2At5g40330MYB23 (MYB DOMAIN PROTEIN 23)C.G.S.X.
0.085e-652Oryza sativaOs.8987.1.S1_at---0C.G.S.X.
0.109e-754Populus trichocarpaPtpAffx.24581.1.A1_s_atCV255180hypothetical protein-4e-16At4g39235unknown proteinC.G.S.X.
0.052e+032Triticum aestivumTaAffx.31383.1.S1_atCA616853--4e+0At5g59000zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.092e-444Vitis vinifera1610015_atCB350036hypothetical protein LOC100264110-9e-2At3g05570unknown proteinC.G.S.X.
0.077e-546Zea maysZm.10216.1.A1_atCD440291hypothetical protein LOC100276703-7e-9At3g05570unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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