Gene omics information

Query gene ID At2g21140
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5773.8At2g21140816649ATPRP2 (PROLINE-RICH PROTEIN 2)Proline-rich protein expressed in expanding leaves, stems, flowers, and siliques.S.X.H.G.
0.5065.3At2g43050818907ATPMEPCRDF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMS.X.H.G.
0.2522.6At1g27670839659unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2420.7At5g04530830332KCS19 (3-KETOACYL-COA SYNTHASE 19)Encodes KCS19, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).S.X.H.G.
0.2319.3At4g16515827350unknown proteinF:molecular_function unknown;P:unknown;C:endomembrane system;PS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
59.399.8GSM134513Col-0_4day_dark_-lincomycin_rep1GSE5759red illumination w/o lincomycin
54.299.8GSM131191AtGen_D-24_2-WL_REP2_ATH1GSE5617AtGenExpress: Light treatments
52.899.8GSM131202AtGen_D-36_3-RL_REP3_ATH1GSE5617AtGenExpress: Light treatments
52.499.8GSM131207AtGen_D-41_3-DS_REP3_ATH1GSE5617AtGenExpress: Light treatments
51.399.8GSM131204AtGen_D-38_3-AL_REP3_ATH1GSE5617AtGenExpress: Light treatments
50.799.8GSM131211AtGen_D-45_3-BS_REP3_ATH1GSE5617AtGenExpress: Light treatments
49.299.8GSM131184AtGen_D-16_1-WS_REP1_ATH1GSE5617AtGenExpress: Light treatments
48.699.8GSM131187AtGen_D-20_2-RL_REP2_ATH1GSE5617AtGenExpress: Light treatments
48.599.8GSM131190AtGen_D-23_2-UL_REP2_ATH1GSE5617AtGenExpress: Light treatments
47.799.8GSM131196AtGen_D-30_2-AS_REP2_ATH1GSE5617AtGenExpress: Light treatments
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.242e-1273At4g38770830032PRP4 (PROLINE-RICH PROTEIN 4)Encodes one of four proline-rich proteins in Arabidopsis which are predicted to localize to the cell wall. Transcripts are most abundant in aerial organs of the plant.C.G.S.X.
0.025e-136At3g53610824529ATRAB8GTPase AtRAB8 (atrab8)C.G.S.X.
0.012e+034At5g15130831365WRKY72member of WRKY Transcription Factor; Group II-bC.G.S.X.
0.012e+034At4g35800829734NRPB1 (RNA POLYMERASE II LARGE SUBUNIT)Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.C.G.S.X.
0.022e+034At3g23960821980F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.012e+034At2g40980818698-F:unknown;P:unknown;C:plasma membrane;BPOC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Glycine maxPsAffx.psMA009xM07f_atPsAffx.psMA009xM07f--2e+1At5g63000unknown proteinC.G.S.X.
0.039e-134Hordeum vulgareAJ236837_atAJ236837--3e-3At4g02450glycine-rich proteinC.G.S.X.
0.021e+132Oryza sativaOs09g04024009637.m02035--4e+0At2g44360unknown proteinC.G.S.X.
0.072e-138Populus trichocarpaPtp.5364.1.S1_s_atCK100365hypothetical protein-1e-1At2g21140ATPRP2 (PROLINE-RICH PROTEIN 2)C.G.S.X.
0.032e+034Triticum aestivumTaAffx.55852.1.S1_atCA660360--6e-1At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)C.G.S.X.
0.032e+032Vitis vinifera1614323_s_atCB973766hypothetical protein LOC100245498-1e-22At3g58680MBF1B (MULTIPROTEIN BRIDGING FACTOR 1B)C.G.S.X.
0.033e+032Zea maysZmAffx.1359.1.S1_at40794996-47--1e+1At5g5729060S acidic ribosomal protein P3 (RPP3B)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0009664A process that results in the assembly and arrangement of constituent parts of the cellulose and pectin-containing cell wall, or in the disassembly of the cellulose and pectin-containing cell wall. This process is carried out at the cellular level. An example of this process is found in Arabidopsis thaliana.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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