Gene omics information

Query gene ID At2g20800
Gene name NDB4 (NAD(P)H dehydrogenase B4)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.9195.6At2g20800816609NDB4 (NAD(P)H dehydrogenase B4)F:NADH dehydrogenase activity;P:unknown;C:extrinsic to mitochondrial inner membrane, mitochondrion, plastid;BOFPAMS.X.H.G.
0.8089.8At1g71380843479ATCEL3 (ARABIDOPSIS THALIANA CELLULASE 3)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plasma membrane, plant-type cell wall;PBMOFS.X.H.G.
0.6176.7At1g22090838814emb2204 (embryo defective 2204)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PS.X.H.G.
0.5974.7At1g3624084053060S ribosomal protein L30 (RPL30A)F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit;MOAFPBS.X.H.G.
0.5368.6At2g01610814690invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.5065.3At2g47260819339WRKY23member of WRKY Transcription Factor; Group IS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
187.3100.0GSM134206Murray_3-3_D5-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cells
157.099.9GSM134202Murray_3-1_D1-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cells
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.203e-25117At4g05020825844NDB2 (NAD(P)H dehydrogenase B2)F:disulfide oxidoreductase activity, oxidoreductase activity, FAD binding;P:unknown;C:extrinsic to mitochondrial inner membrane, mitochondrion;BOFPAMC.G.S.X.
0.264e-1273At4g21490828234NDB3F:NADH dehydrogenase activity;P:unknown;C:unknown;BOFPAMC.G.S.X.
0.119e-756At4g28220828937NDB1 (NAD(P)H dehydrogenase B1)F:disulfide oxidoreductase activity, NADH dehydrogenase activity;P:unknown;C:extrinsic to mitochondrial inner membrane;BOFPAMC.G.S.X.
0.021e-346At2g29990817549NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2)F:NADH dehydrogenase activity, oxidoreductase activity, FAD binding;P:unknown;C:intrinsic to mitochondrial inner membrane;BOFPAMC.G.S.X.
0.016e-240At4g19560827698CYCT1F:cyclin-dependent protein kinase activity;P:regulation of cell cycle;C:cellular_component unknown;MFPOBAC.G.S.X.
0.012e-138At3g47890823944ubiquitin thiolesterase/ zinc ion bindingF:ubiquitin thiolesterase activity, zinc ion binding;P:ubiquitin-dependent protein catabolic process;C:intracellular;MOPFBAVC.G.S.X.
0.032e-138At1g07180837229NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1)Internal NAD(P)H dehydrogenase in mitochondria. The predicted protein sequence has high homology with other designated NAD(P)H DHs from microorganisms; the capacity for matrix NAD(P)H oxidation via the rotenone-insensitive pathway is significantly reduced in the Atndi1 mutant plant line; the in vitro translation product of AtNDI1 is imported into isolated mitochondria and located on the inside of the inner membrane.C.G.S.X.
0.019e-136At5g04895830371ATP binding / ATP-dependent helicase/ double-stranded RNA binding / helicase/ nucleic acid bindingF:double-stranded RNA binding, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding;P:biological_process unknown;C:mitochondrion, intracellular;BMOFPVC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.112e-1481Glycine maxGmaAffx.4294.1.S1_atAI431107--3e-18At4g05020NDB2 (NAD(P)H dehydrogenase B2)C.G.S.X.
0.084e-136Hordeum vulgareContig7354_atContig7354--9e-17At4g05020NDB2 (NAD(P)H dehydrogenase B2)C.G.S.X.
0.153e-1171Oryza sativaOs05g0331200AK100884.1-External rotenone-insensitive NADPH dehydrogenase7e-8At4g05020NDB2 (NAD(P)H dehydrogenase B2)C.G.S.X.
0.279e-1789Populus trichocarpaPtpAffx.211325.1.S1_atpmrna22204hypothetical protein-7e-17At2g20800NDB4 (NAD(P)H dehydrogenase B4)C.G.S.X.
0.101e-656Triticum aestivumTa.27180.1.S1_atBT009120.1--2e-10At4g21490NDB3C.G.S.X.
0.103e-22105Vitis vinifera1621765_atCD004023--3e-49At4g05020NDB2 (NAD(P)H dehydrogenase B2)C.G.S.X.
0.124e-756Zea maysZm.13613.1.A1_atCF623212hypothetical protein LOC100275557-3e-6At4g21490NDB3C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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