Gene omics information

Query gene ID At2g20620
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3948.4At2g20620816588unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5368.6At5g19710832091-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4050.8At2g31770817734zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MOFPVS.X.H.G.
0.3948.4At5g56620835763anac099 (Arabidopsis NAC domain containing protein 99)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PMS.X.H.G.
0.3235.7At1g26795839221self-incompatibility protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.2830.3At5g40360834034MYB115 (myb domain protein 115)putative transcription factor (MYB115)S.X.H.G.
0.2522.6At2g41470818745unknown proteinF:molecular_function unknown;P:biological_process unknown;C:vacuole;PMOS.X.H.G.
0.2319.3At2g47430819356CKI1 (CYTOKININ-INDEPENDENT 1)Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
367.1100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
348.4100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
308.9100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
304.7100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
292.8100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
230.4100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
221.7100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
210.3100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
207.8100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
204.8100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.062e-344At2g20625816589unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.034e-136At5g279446240316sequence-specific DNA binding / transcription factorF:transcription factor activity, sequence-specific DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PC.G.S.X.
0.024e-136At5g26950832753AGL93F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus, chloroplast;PC.G.S.X.
0.024e-136At5g47980834849transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity, acyltransferase activity;P:unknown;C:cellular_component unknown;PFBC.G.S.X.
0.024e-136At5g27070832765AGL53F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus, plasma membrane;PC.G.S.X.
0.024e-136At2g18150816328peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress, response to nematode;C:cell wall;PFOBMC.G.S.X.
0.024e-136At1g64970842805G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE)gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leavesC.G.S.X.
0.012e+034At5g18360831954disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PMBOFAVC.G.S.X.
0.012e+034At5g23390832403unknown proteinF:molecular_function unknown;P:unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e-136Glycine maxHgAffx.19245.1.S1_atCA939935--6e-2At5g26070hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.023e+032Hordeum vulgareContig12338_atContig12338--6e-5At3g50550unknown proteinC.G.S.X.
0.038e-136Oryza sativaOsAffx.17660.1.S1_at---0C.G.S.X.
0.036e-136Populus trichocarpaPtpAffx.58824.1.A1_atCK089459--7e+0At5g02680ATP binding / aminoacyl-tRNA ligase/ nucleotide bindingC.G.S.X.
0.032e+034Triticum aestivumTaAffx.117133.1.S1_x_atBQ609653--2e-1At3g49300proline-rich family proteinC.G.S.X.
0.035e-134Vitis vinifera1620261_atCB341941--8e-1At2g20620unknown proteinC.G.S.X.
0.025e-238Zea maysZm.13184.1.S1_atCA409097--2e-1At2g20620unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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