Gene omics information

Query gene ID At2g20142
Gene name transmembrane receptor
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At2g201422745551transmembrane receptorF:transmembrane receptor activity;P:signal transduction, innate immune response;C:intrinsic to membrane;PS.X.H.G.
0.6781.6At1g51620841587protein kinase family proteinF:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.6781.6At4g37770829933ACS8Encodes an auxin inducible ACC synthase.S.X.H.G.
0.6176.7At4g38420829999sks9 (SKU5 Similar 9)F:oxidoreductase activity, copper ion binding;P:unknown;C:plant-type cell wall;FBPMOAS.X.H.G.
0.4050.8At1g30135839893JAZ8 (JASMONATE-ZIM-DOMAIN PROTEIN 8)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
525.0100.0E-MEXP-807-raw-cel-1173273116
485.0100.0E-MEXP-807-raw-cel-1173273088
408.6100.0E-MEXP-807-raw-cel-1173273196
359.7100.0E-MEXP-807-raw-cel-1173273170
356.0100.0E-MEXP-807-raw-cel-1173273223
336.4100.0E-MEXP-807-raw-cel-1173273060
70.399.9GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.
59.299.8E-MEXP-546-raw-cel-863289404
40.299.8E-MEXP-546-raw-cel-863289450
36.099.7GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.022e-344At5g41750834178disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAC.G.S.X.
0.022e-344At5g41740834177disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PMBOFAC.G.S.X.
0.022e-344At5g41540834156disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAC.G.S.X.
0.015e-136At5g41550834157disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVC.G.S.X.
0.022e+034At5g16830831546SYP21 (SYNTAXIN OF PLANTS 21)member of SYP2 Gene Family. Over-expression of the gene in tobacco protoplasts leads to a disruption of vacuolar transport from the prevacuolar compartment (PVC) to the vacuole, but not from the Golgi apparatus to the plasma membrane.C.G.S.X.
0.012e+034At4g010376240517ubiquitin thiolesteraseF:ubiquitin thiolesterase activity;P:ubiquitin-dependent protein catabolic process;C:intracellular;MOFBPVAC.G.S.X.
0.032e+034At4g004676240657-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.012e+034At4g24200828521-F:unknown;P:unknown;C:mitochondrion;OBMFPC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e-136Glycine maxGma.8706.1.S1_atBU762562--2e-1At2g20142transmembrane receptorC.G.S.X.
0.036e-238Hordeum vulgareContig12954_atContig12954--1e+0At2g25060plastocyanin-like domain-containing proteinC.G.S.X.
0.024e+034Oryza sativaOs08g04748009636.m03717-Esterase/lipase/thioesterase domain containingprotein6e-1At4g36500unknown proteinC.G.S.X.
0.034e-240Populus trichocarpaPtpAffx.225144.1.S1_s_atpmrna44277hypothetical protein-2e-1At4g16930disease resistance protein (TIR-NBS-LRR class), putativeC.G.S.X.
0.038e+032Triticum aestivumTaAffx.84166.1.S1_atCA643436--7e-1At2g10014unknown proteinC.G.S.X.
0.055e-134Vitis vinifera1621681_atCB003394--1e-3At2g03030Toll-Interleukin-Resistance (TIR) domain-containing proteinC.G.S.X.
0.028e-134Zea maysZm.5261.1.A1_atCF041434hypothetical protein LOC100273065-2e-37At2g41540GPDHC1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
LGO:0045087Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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