CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g20070

Gene name -

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.24 20.7 At2g20070 816526 - F:molecular_function unknown;P:unknown;C:endomembrane system;P S.X. H.G.
0.28 30.3 At1g23610 838971 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.27 26.2 At4g16930 827401 disease resistance protein (TIR-NBS-LRR class), putative F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P S.X. H.G.
0.25 22.6 At1g23910 839002 - F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P S.X. H.G.
0.25 22.6 At3g28120 822436 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
560.8 100.0 GSM184537 Whole roots 2hr KCl control treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
314.9 100.0 E-MEXP-509-raw-cel-829148561
240.4 100.0 E-MEXP-509-raw-cel-829148525
221.6 100.0 E-MEXP-509-raw-cel-829148385
195.9 100.0 E-MEXP-509-raw-cel-829148597
188.0 100.0 E-MEXP-509-raw-cel-829148201
165.2 100.0 E-MEXP-509-raw-cel-829148090
162.6 99.9 E-MEXP-509-raw-cel-829148877
149.7 99.9 E-MEXP-509-raw-cel-829148165
126.6 99.9 E-MEXP-509-raw-cel-829148348
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.02 5e-1 34 At3g24200 822006 FAD binding / monooxygenase/ oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen F:oxidoreductase activity, monooxygenase activity, FAD binding, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen;P:ubiquinone biosynthetic process, metabolic process;C:unknown;BOFMPA C.G. S.X.
0.02 5e-1 34 At2g44530 819061 ribose-phosphate pyrophosphokinase, putative / phosphoribosyl diphosphate synthetase, putative F:magnesium ion binding, ribose phosphate diphosphokinase activity;P:cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process;C:chloroplast;OBMFAPV C.G. S.X.
0.02 5e-1 34 At2g17590 816266 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;PFM C.G. S.X.
0.03 5e-1 34 At1g35160 840403 GF14 PHI (GF14 PROTEIN PHI CHAIN) GF14 protein phi chain member of 14-3-3 protein family. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1 C.G. S.X.
0.01 2e+0 32 At5g25930 832662 leucine-rich repeat family protein / protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, membrane;MPOBFVA C.G. S.X.
0.02 2e+0 32 At5g01020 831918 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOBFVA C.G. S.X.
0.03 2e+0 32 At3g61770 825350 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;BOP C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 3e+0 32 Glycine max HgAffx.9248.1.S1_at CB379254 - - 1e+0 At2g24615 - C.G. S.X.
0.06 2e-1 34 Hordeum vulgare HS18M03u_s_at HS18M03u - - 6e-1 At2g20070 - C.G. S.X.
0.05 4e+0 32 Oryza sativa Os.23180.1.S1_at - - - 0 C.G. S.X.
0.05 7e-1 34 Populus trichocarpa PtpAffx.213490.1.S1_at pmrna26373 hypothetical protein - 2e-1 At3g22480 prefoldin-related KE2 family protein C.G. S.X.
0.05 5e-1 34 Triticum aestivum TaAffx.121337.1.S1_at BG904240 - - 8e-1 At2g20070 - C.G. S.X.
0.04 2e+0 30 Vitis vinifera 1618589_s_at CF206361.1 hypothetical protein LOC100260620 - 4e+0 At3g55515 RTFL7 (ROTUNDIFOLIA LIKE 7) C.G. S.X.
0.04 3e+0 30 Zea mays Zm.940.1.S1_at BF729537 - - 6e-2 At1g70780 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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