CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g19800

Gene name MIOX2 (MYO-INOSITOL OXYGENASE 2)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.11 4.1 At2g19800 816499 MIOX2 (MYO-INOSITOL OXYGENASE 2) Encodes a myo-inositol oxygenase family gene. S.X. H.G.
0.50 65.3 At3g45300 823668 IVD (ISOVALERYL-COA-DEHYDROGENASE) Encodes isovaleryl-coenzyme a dehydrogenase. S.X. H.G.
0.50 65.3 At5g56870 835789 BGAL4 (beta-galactosidase 4) F:beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;PBMFOA S.X. H.G.
0.40 50.8 At1g03090 838362 MCCA MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion. S.X. H.G.
0.22 17.5 At5g41080 834110 glycerophosphoryl diester phosphodiesterase family protein F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BOMFPAV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
52.9 99.8 E-MEXP-513-raw-cel-829814446
47.4 99.8 GSM133400 Knight_2-3_sfr6-lt_Rep1_ATH1 GSE5710 Dark-induced gene expression in sfr6
39.2 99.8 E-MEXP-513-raw-cel-829814430
37.1 99.7 GSM158702 HY213-ESTRADIOL-REP1 GSE6954 Identification of AGL24 downstream genes by using XVE inducible system
36.9 99.7 E-ATMX-28-raw-cel-1441104826
35.8 99.7 GSM142664 NE001_ATH1_A2-Evans-w30 GSE6154 Molecular basis of respiratory burst-mediated thermotolerance in Arabidopsis
33.9 99.7 GSM158703 WT-ESTRADIOL-REP1 GSE6954 Identification of AGL24 downstream genes by using XVE inducible system
33.6 99.7 E-MEXP-1094-raw-cel-1379507513
33.3 99.7 GSM304029 Wildtype no treatement rep 2 GSE12029 NFYA5, a CCAAT binding transcription factor important for drought resistance in Arabidopsis
33.3 99.7 GSM142667 NE001_ATH1_A5-Evans-m30 GSE6154 Molecular basis of respiratory burst-mediated thermotolerance in Arabidopsis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.42 8e-40 165 At5g56640 835765 MIOX5 Myo-Inositol Oxygenase gene family C.G. S.X.
0.34 1e-13 77 At4g26260 828732 MIOX4 Encodes a myo-inositol oxygenase. C.G. S.X.
0.16 2e-6 54 At1g14520 838014 MIOX1 (MYO-INISITOL OXYGENASE) Encodes MIOX1. Belongs to myo-inositol oxygenase gene family. C.G. S.X.
0.01 8e-3 42 At1g76780 844012 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA C.G. S.X.
0.02 1e-1 38 At2g15780 816073 glycine-rich protein F:electron carrier activity, copper ion binding;P:unknown;C:endomembrane system;MBOPFVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.20 7e-4 46 Glycine max Gma.5816.1.S1_at BI787790 - - 3e-14 At5g56640 MIOX5 C.G. S.X.
0.20 2e-11 69 Hordeum vulgare Contig4011_at Contig4011 - - 1e-5 At1g14520 MIOX1 (MYO-INISITOL OXYGENASE) C.G. S.X.
0.14 1e-9 65 Oryza sativa Os06g0561000 AK068862.1 - Myo-inositol oxygenase 2e-13 At5g56640 MIOX5 C.G. S.X.
0.28 2e-7 57 Populus trichocarpa PtpAffx.162311.1.S1_at BP933945 hypothetical protein - 2e-22 At4g26260 MIOX4 C.G. S.X.
0.24 2e-9 63 Triticum aestivum Ta.2631.1.S1_at CK203255 - - 5e-8 At1g14520 MIOX1 (MYO-INISITOL OXYGENASE) C.G. S.X.
0.06 2e-4 46 Vitis vinifera 1607430_at CF372861 hypothetical protein LOC100254212 - 3e-7 At4g26260 MIOX4 C.G. S.X.
0.12 1e-14 79 Zea mays Zm.16227.1.A1_at BI180294 hypothetical protein LOC100273421 - 2e-10 At1g14520 MIOX1 (MYO-INISITOL OXYGENASE) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0006949 The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane. Syncytia are normally derived from single cells that fuse or fail to complete cell division.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00053 Ascorbate and aldarate metabolism
00562 Inositol phosphate metabolism
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