Gene omics information

Query gene ID At2g19620
Gene name Ndr family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g19620816481Ndr family proteinF:molecular_function unknown;P:cell differentiation;C:cellular_component unknown;MBPOS.X.H.G.
0.2014.4At1g75310843868AUL1F:heat shock protein binding;P:protein folding;C:unknown;MOBFPVAS.X.H.G.
0.071.9At2g02170814748remorin family proteinF:DNA binding;P:biological_process unknown;C:plasma membrane;OBMPFAVS.X.H.G.
0.040.9At3g13560820558glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PFOS.X.H.G.
0.010.2At1g09160837436protein phosphatase 2C-related / PP2C-relatedF:protein serine/threonine phosphatase activity, catalytic activity;P:unknown;C:plasma membrane;PMOFBVAS.X.H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
84.199.9GSM133781Lindsey_1-6_globular-basal_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
21.699.6GSM184518Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
16.199.5GSM131666ATGE_46_CGSE5633AtGenExpress: Developmental series (shoots and stems)
15.199.4GSM131662ATGE_29_B2GSE5633AtGenExpress: Developmental series (shoots and stems)
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.444e-26119At5g56750835777Ndr family proteinF:molecular_function unknown;P:cell differentiation;C:cellular_component unknown;MPBOC.G.S.X.
0.105e-446At5g11790831051Ndr family proteinF:molecular_function unknown;P:cell differentiation;C:cellular_component unknown;MPOBC.G.S.X.
0.013e-240At4g35520829704MLH3 (MUTL PROTEIN HOMOLOG 3)DNA mismatch repair protein similar to MutL. Required for normal levels of meiotic crossoversC.G.S.X.
0.011e-138At5g25880832657ATNADP-ME3 (NADP-malic enzyme 3)The malic enzyme (EC encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals.C.G.S.X.
0.011e-138At2g23950816928leucine-rich repeat family protein / protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
0.015e-136At4g27430828851CIP7 (COP1-INTERACTING PROTEIN 7)Positive regulator of light-regulated genes. Novel nuclear protein which requires light for its high level expression.C.G.S.X.
0.015e-136At2g26780817219bindingF:binding;P:biological_process unknown;C:membrane;MFPOC.G.S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.253e-963Glycine maxGmaAffx.72693.1.S1_atBG404878--2e-45At5g56750Ndr family proteinC.G.S.X.
0.133e-756Hordeum vulgareContig8803_atContig8803--1e-17At5g56750Ndr family proteinC.G.S.X.
0.123e-448Oryza sativaOs02g0224800AK066213.1-Ndr family protein6e-17At5g56750Ndr family proteinC.G.S.X.
0.254e-24113Populus trichocarpaPtpAffx.145592.1.S1_atCX173301hypothetical protein-9e-45At5g56750Ndr family proteinC.G.S.X.
0.095e-136Triticum aestivumTaAffx.105682.1.S1_atCD938730--1e-3At5g56750Ndr family proteinC.G.S.X.
0.129e-31133Vitis vinifera1622262_atCF214402hypothetical protein LOC100254362-2e-20At5g56750Ndr family proteinC.G.S.X.
0.041e-240Zea maysZm.18461.1.A1_atCO523653--2e-8At5g56750Ndr family proteinC.G.S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0030154The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage