CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g19210

Gene name leucine-rich repeat protein kinase, putative

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At2g19210 816438 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA S.X. H.G.
0.60 75.7 At3g43820 3769603 - F:unknown;P:unknown;C:unknown S.X. H.G.
0.59 74.7 At1g35740 3766959 - F:unknown;P:unknown;C:unknown S.X. H.G.
0.58 73.8 At5g63390 836458 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P S.X. H.G.
0.57 73.8 At1g76910 844026 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown S.X. H.G.
0.56 73.0 At1g66170 842932 MMD1 (MALE MEIOCYTE DEATH 1) encodes a PHD-domain containing protein required for male meiosis. Gene is expressed in developing male meiocytes and protein is localized to the nucleus. S.X. H.G.
0.54 69.5 At5g37080 833679 transposable element gene F:unknown;P:unknown;C:unknown S.X. H.G.
0.53 68.6 At1g55060 841949 UBQ12 (UBIQUITIN 12) Ubiquitin-like gene, believed to be a pseudogene because of amino acid substitutions in 3 of the 5 ubiquitin repeats found in the UBQ12 gene product S.X. H.G.
0.53 68.6 At1g54700 841911 - F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P S.X. H.G.
0.52 67.4 At2g07691 815367 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
382.1 100.0 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
361.0 100.0 GSM184497 Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
357.4 100.0 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
294.2 100.0 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
290.7 100.0 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
263.7 100.0 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
256.1 100.0 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
219.6 100.0 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
212.6 100.0 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
209.8 100.0 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.62 6e-163 575 At2g19230 816440 kinase F:kinase activity;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.40 5e-71 270 At4g29990 829122 light repressible receptor protein kinase F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.27 8e-70 266 At2g19190 816436 FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1) Receptor-like protein kinase. Involved in early defense signaling. C.G. S.X.
0.06 1e-25 119 At4g00280 827209 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.07 7e-24 113 At1g51890 841616 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.06 1e-13 79 At1g51870 841614 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.07 1e-13 79 At1g51860 841613 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.07 2e-11 71 At1g51880 841615 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.07 2e-8 61 At1g05700 837077 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 8e-3 44 Glycine max GmaAffx.65419.1.S1_at CD405955 - - 1e-6 At2g43230 serine/threonine protein kinase, putative C.G. S.X.
0.02 4e-2 40 Hordeum vulgare Contig11158_at Contig11158 - - 6e-48 At2g30740 serine/threonine protein kinase, putative C.G. S.X.
0.02 3e-6 56 Oryza sativa Os05g0524600 9633.m04198 - Protein kinase domain containing protein 1e-4 At3g17410 serine/threonine protein kinase, putative C.G. S.X.
0.02 3e-2 42 Populus trichocarpa PtpAffx.208404.1.S1_at pmrna16704 hypothetical protein - 1e-7 At1g69910 protein kinase family protein C.G. S.X.
0.01 1e+0 36 Triticum aestivum Ta.4434.2.S1_at BJ260626 - - 2e-7 At5g63930 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.02 1e-7 57 Vitis vinifera 1621082_a_at CF516167 hypothetical protein LOC100262185 - 3e-13 At5g02800 protein kinase family protein C.G. S.X.
0.02 9e-3 42 Zea mays Zm.721.1.A1_at BM267834 Salt-inducible putative protein serine/threonine/tyrosine kinase - 1e-33 At1g06700 serine/threonine protein kinase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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