CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g19190

Gene name FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.80 89.8 At2g19190 816436 FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1) Receptor-like protein kinase. Involved in early defense signaling. S.X. H.G.
0.75 86.9 At2g17740 816283 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;PO S.X. H.G.
0.75 86.9 At4g12500 826862 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:unknown;POBMVFA S.X. H.G.
0.67 81.6 At1g49000 841322 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P S.X. H.G.
0.67 81.6 At2g43620 818964 chitinase, putative F:chitin binding, chitinase activity;P:response to salt stress;C:apoplast;PBFOVM S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
203.7 100.0 GSM128686 Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
195.4 100.0 E-NASC-76-raw-cel-1359878976
186.3 100.0 E-NASC-76-raw-cel-1359878900
181.7 100.0 E-MEXP-1094-raw-cel-1379507313
167.6 100.0 GSM142853 MG001_ATH1_A6-Torres-2N6 GSE6176 Impact of Type III effectors on plant defense responses
167.1 100.0 E-NASC-76-raw-cel-1359879158
152.3 99.9 GSM142852 MG001_ATH1_A5-Torres-2N3 GSE6176 Impact of Type III effectors on plant defense responses
146.1 99.9 GSM131139 AtGen_B-25_2-4-4_REP2_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
138.6 99.9 GSM131111 AtGen_B-39_3-4-4_REP3_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
136.6 99.9 GSM142851 MG001_ATH1_A4-Torres-2N1 GSE6176 Impact of Type III effectors on plant defense responses
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.42 1e-139 498 At4g29990 829122 light repressible receptor protein kinase F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.31 1e-80 301 At2g19230 816440 kinase F:kinase activity;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.27 8e-70 266 At2g19210 816438 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.08 4e-7 57 At1g05700 837077 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.07 4e-7 57 At1g51880 841615 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.04 2e-5 52 At1g51860 841613 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.07 2e-5 52 At1g51890 841616 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.05 9e-5 50 At5g16900 831553 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.03 9e-5 50 At3g21340 821688 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 3e-11 71 Glycine max GmaAffx.65419.2.S1_at BU762206 - - 4e-3 At1g51890 leucine-rich repeat protein kinase, putative C.G. S.X.
0.03 2e-1 38 Hordeum vulgare Contig5016_at Contig5016 - - 1e-30 At2g47060 serine/threonine protein kinase, putative C.G. S.X.
0.03 3e-3 46 Oryza sativa OsAffx.17610.1.S1_at - - - 0 C.G. S.X.
0.02 1e-4 50 Populus trichocarpa PtpAffx.116969.1.S1_s_at CF227940 hypothetical protein - 9e-45 At1g56720 protein kinase family protein C.G. S.X.
0.02 4e-4 48 Triticum aestivum Ta.24642.2.S1_a_at CA617567 - - 5e-12 At3g62220 serine/threonine protein kinase, putative C.G. S.X.
0.02 2e+0 34 Vitis vinifera 1616171_at BM437490 hypothetical protein LOC100251471 - 3e-18 At5g48380 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
0.02 9e-3 42 Zea mays Zm.721.1.A1_at BM267834 Salt-inducible putative protein serine/threonine/tyrosine kinase - 1e-33 At1g06700 serine/threonine protein kinase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0042742 Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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