Gene omics information

Query gene ID At2g18980
Gene name peroxidase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5368.6At2g18980816415peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMS.X.H.G.
0.6075.7At3g63470825522scpl40 (serine carboxypeptidase-like 40)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PFMOBS.X.H.G.
0.5368.6At1g27140839603ATGSTU14 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 14)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.5065.3At3g01220821232ATHB20 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 20)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein, its expression is auxin-inducible and dependent on MP gene activity.S.X.H.G.
0.4659.8At4g28650828983leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.4355.3At5g15150831367ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)homeobox-containing gene with an unusual feature: a leucine zipper motif adjacent to the carboxyl-terminal of the homeodomain structure. This gene is expressed primarily in the cortex of the root and the stem.S.X.H.G.
0.4050.8At1g67330843054unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POBS.X.H.G.
0.4050.8At3g50640824227unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.3643.6At2g25810817123TIP4F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
87.799.9GSM252692Section of Root from 270 mm to 340 mm harvested immediately rep3GSE9996Organ regeneration in plants is independent of stem cell niche activity
80.199.9GSM266665Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
80.099.9GSM266670Arabidopsis, root cells, cortex, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
65.199.8GSM226536L6SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
64.299.8GSM184835Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 5GSE7639Expression analysis of root developmental zones after treatment with salt
64.099.8GSM184477Lateral Root Cap root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
58.099.8GSM184891Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
47.999.8GSM266662Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
47.499.8GSM184889Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
46.199.8GSM266671Arabidopsis, root cells, cortex, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.692e-86319At4g30170829140peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBC.G.S.X.
0.065e-756At5g67400836876peroxidase 73 (PER73) (P73) (PRXR11)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOC.G.S.X.
0.038e-652At1g49570841381peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBC.G.S.X.
0.035e-446At5g58400835953peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMC.G.S.X.
0.118e-342At4g37520829907peroxidase 50 (PER50) (P50) (PRXR2)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:cytoplasm;PFOMC.G.S.X.
0.028e-342At3g49960824158peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOC.G.S.X.
0.068e-342At1g05260837028RCI3 (RARE COLD INDUCIBLE GENE 3)Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.C.G.S.X.
0.113e-240At4g37530829908peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to salt stress;C:endomembrane system;PFOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.141e-552Glycine maxGma.4886.2.S1_atAW234624--6e-6At2g18980peroxidase, putativeC.G.S.X.
0.052e-136Hordeum vulgareContig7082_atContig7082--1e-4At5g15180peroxidase, putativeC.G.S.X.
0.056e-550Oryza sativaOs06g05212009634.m03088-Haem peroxidase, plant/fungal/bacterial familyprotein1e-4At3g50990electron carrier/ heme binding / peroxidaseC.G.S.X.
0.055e-859Populus trichocarpaPtp.7068.1.S1_atDN487969hypothetical protein-2e-7At4g30170peroxidase, putativeC.G.S.X.
0.042e-344Triticum aestivumTaAffx.128529.2.S1_atBJ280134--1e-3At2g18980peroxidase, putativeC.G.S.X.
0.036e-134Vitis vinifera1615126_atCB921167hypothetical protein LOC100265768-3e-11At4g32640protein binding / zinc ion bindingC.G.S.X.
0.028e-134Zea maysZm.6907.1.A1_atAI065607--1e+1At5g47630mtACP3 (mitochondrial acyl carrier protein 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00413Link to KaPPA-View 4Peroxidase, class III



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00360Link to KEGG PATHWAYPhenylalanine metabolism
00680Link to KEGG PATHWAYMethane metabolism
00940Link to KEGG PATHWAYPhenylpropanoid biosynthesis
01061Link to KEGG PATHWAYBiosynthesis of phenylpropanoids
01100Link to KEGG PATHWAYMetabolic pathways
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