Gene omics information

Query gene ID At2g18810
Gene name DNA binding
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g18810816396DNA bindingF:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;PS.X.H.G.
0.7888.6At5g44470834474-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6982.9At4g21950828284unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6781.6At1g72080843539unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOFPBVAS.X.H.G.
0.6378.1At1g59630842253F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6378.1At4g08450826403disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;BPOMFVAS.X.H.G.
0.6176.7At2g32050817765cell cycle control protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPS.X.H.G.
0.6075.7At1g29570839834zinc finger protein-relatedF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MOBFPVAS.X.H.G.
0.5873.8At2g24410816977-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOS.X.H.G.
0.5873.8At5g37860833764copper-binding family proteinF:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:cellular_component unknown;POBFMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
465.8100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
340.8100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
334.4100.0GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
306.3100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
283.1100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
276.7100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
271.6100.0GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
264.5100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
262.6100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
255.6100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.772e-175615At2g31720817728DNA bindingF:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;PC.G.S.X.
0.361e-37157At2g318622745575-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.012e-240At4g23360828435unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFBC.G.S.X.
0.039e-238At5g02600831874heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:chloroplast;POMFVBC.G.S.X.
0.011e+034At5g37570833735pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMC.G.S.X.
0.021e+034At5g46290834671KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I)3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA,C.G.S.X.
0.011e+034At1g19835838571unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOBFPAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.028e+032Glycine maxPsAffx.C5000015_atPsAffx.C5000015--4e-4At3g29020MYB110 (myb domain protein 110)C.G.S.X.
0.031e+130Hordeum vulgareHR01G08u_atHR01G08u--1e+1At5g03010kelch repeat-containing proteinC.G.S.X.
0.043e+034Oryza sativaOsAffx.9637.1.S1_at---0C.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.9537.1.S1_atDN499542--8e-11At5g28300trihelix DNA-binding protein, putativeC.G.S.X.
0.036e+032Triticum aestivumTaAffx.7518.1.S1_atCA657525--3e+0At5g02790In2-1 protein, putativeC.G.S.X.
0.036e+030Vitis vinifera1620500_atCB349662hypothetical protein LOC100256536-1e-3At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
0.021e-136Zea maysZm.4404.1.S1_atCF056620hypothetical protein LOC100273570-8e-9At5g46110APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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