Gene omics information

Query gene ID At2g18590
Gene name carbohydrate transmembrane transporter/ sugar:hydrogen symporter
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g18590816374carbohydrate transmembrane transporter/ sugar:hydrogen symporterF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:biological_process unknown;C:endomembrane system, membrane;BOMFPAVS.X.H.G.
0.7284.8At5g46310834674WRKY family transcription factorF:transcription factor activity;P:regulation of transcription, DNA-dependent;C:unknown;FPS.X.H.G.
0.7184.2At2g27520817298F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMS.X.H.G.
0.7083.5At4g17580827475Bax inhibitor-1 family protein / BI-1 family proteinF:molecular_function unknown;P:negative regulation of apoptosis, regulation of apoptosis, apoptosis;C:integral to membrane;BMOFPVS.X.H.G.
0.6982.9At3g43900823506unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6982.9At4g041203770008transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.6781.6At4g106903770312transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.6781.6At5g52975835376unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.6680.1At2g15260816015zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;POFMBS.X.H.G.
0.6680.1At4g17130---S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
698.5100.0GSM133302NO.27GSE5699AtGenExpress: ARR21C overexpression
646.9100.0GSM133300NO.25GSE5699AtGenExpress: ARR21C overexpression
565.3100.0GSM133301NO.26GSE5699AtGenExpress: ARR21C overexpression
171.4100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
161.599.9GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
72.599.9GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
62.999.8GSM133766Lindsey_1-18_torpedo-root_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
56.299.8GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
53.099.8GSM133778Lindsey_1-2_globular-apical_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
45.699.8GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.233e-963At4g36790829832transporter-relatedF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:biological_process unknown;C:membrane;BOMFAPVC.G.S.X.
0.024e-240At5g58750835989wound-responsive protein-relatedF:binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BPFOC.G.S.X.
0.027e-136At5g4152083415440S ribosomal protein S10 (RPS10B)F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, chloroplast;MPBOFVC.G.S.X.
0.027e-136At4g00955827942-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMC.G.S.X.
0.017e-136At1g06560837167NOL1/NOP2/sun family proteinF:RNA binding;P:biological_process unknown;C:cellular_component unknown;BOMAFPC.G.S.X.
0.013e+034At5g60210836143-F:unknown;P:unknown;C:plasma membrane;MOBFPAVC.G.S.X.
0.013e+034At5g07780830671formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:chloroplast;MPOBFVAC.G.S.X.
0.013e+034At4g37750829931ANT (AINTEGUMENTA)ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e+034Glycine maxGmaAffx.51854.1.A1_s_atBU765787--2e-1At5g42460-C.G.S.X.
0.025e+032Hordeum vulgareContig19734_atContig19734--2e+0At2g23900glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinC.G.S.X.
0.056e-654Oryza sativaOs07g0208900AK121714.1-Major facilitator superfamily protein3e-7At4g36790transporter-relatedC.G.S.X.
0.029e-136Populus trichocarpaPtpAffx.63436.1.A1_atCV239560--4e-1At3g52770ZPR3 (LITTLE ZIPPER 3)C.G.S.X.
0.023e+034Triticum aestivumTa.15515.1.S1_atCA485216--5e-1At5g23750remorin family proteinC.G.S.X.
0.033e+032Vitis vinifera1619809_atCD798981hypothetical protein LOC100242668-4e-3At5g06000EIF3G2C.G.S.X.
0.023e-136Zea maysZm.13195.1.S1_atAI973328--7e-1At2g18590carbohydrate transmembrane transporter/ sugar:hydrogen symporterC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage