Gene omics information

Query gene ID At2g18550
Gene name HB-2 (HOMEOBOX-2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5065.3At2g18550816370HB-2 (HOMEOBOX-2)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.S.X.H.G.
0.8693.1At3g13130820501unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMPFBS.X.H.G.
0.7586.9At5g51870835262AGL71 (AGAMOUS-LIKE 71)F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOBAS.X.H.G.
0.6781.6At4g35190829672unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPFAMS.X.H.G.
0.5773.8At5g03840831683TFL1 (TERMINAL FLOWER 1)Controls inflorescence meristem identity. Involved in the floral initiation process. Ortholog of the Antirrhinum gene CENTRORADIALIS (CEN). Involved in protein trafficking to the protein storage vacuole.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
196.0100.0GSM62704arf6 arf8 flowers_stage 13-14GSE2848Auxin Response Factor mediated flower gene expression
190.9100.0GSM242960Steroid day 3 (day3D2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
182.8100.0GSM242961Mock day 7 (day7E1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
176.3100.0GSM242962Mock day 7 (day7E2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
152.599.9E-MEXP-148-raw-cel-350529179
117.199.9GSM242956Steroid day 1 (day1D2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
107.699.9GSM242964Steroid day 7 (day7D2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
105.199.9GSM242963Steroid day 7 (day7D1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
104.099.9GSM242958Mock day 3 (day3E2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
97.199.9E-MEXP-148-raw-cel-350529268
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.252e-21103At4g36740829827ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.C.G.S.X.
0.042e-859At5g03790831723HB51Encodes a homeodomain leucine zipper class I (HD-Zip I) meristem identity regulator that acts together with LFY to induce CAL expression. It binds to the CAL promoter proximal CAATNATTG element. LMI1 acts primarily downstream of LFY in meristem identity regulation. The interaction between LFY, LMI1 and CAL resembles a feed-forward loop transcriptional network motif. The gene also had additional LFY-independent roles in leaf morphogenesis and bract formation.C.G.S.X.
0.051e-654At5g65310836656ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5)Encodes a class I HDZip (homeodomain-leucine zipper) protein that is a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment.C.G.S.X.
0.051e-654At5g66700836803HB53Encodes a homeodomain protein. Member of HD-ZIP 1 family, most closely related to HB5. AtHB53 is auxin-inducible and its induction is inhibited by cytokinin, especially in roots therefore may be involved in root development.C.G.S.X.
0.052e-550At2g22430816775ATHB6Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis.C.G.S.X.
0.053e-446At4g40060830169ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.C.G.S.X.
0.042e-240At5g53980835481ATHB52 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 52)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.C.G.S.X.
0.022e-240At1g27050839594ATHB54 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 54)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e+032Glycine maxHgAffx.3703.1.A1_atCK348987--3e+0At4g22666-C.G.S.X.
0.044e-548Hordeum vulgareContig10112_atContig10112--1e-4At5g65310ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5)C.G.S.X.
0.057e-756Oryza sativaOs03g0188900AK101522.1-Homeobox-leucine zipper protein ATHB-6(Homeodomain transcription factor ATHB-6) (HD-ZIP proteinATHB-6)8e-7At5g65310ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5)C.G.S.X.
0.178e-961Populus trichocarpaPtpAffx.221996.1.S1_atpmrna39179hypothetical protein-5e-9At2g18550HB-2 (HOMEOBOX-2)C.G.S.X.
0.039e-548Triticum aestivumTa.6632.1.S1_atCD938080homeodomain-leucine zipper transcription factor TaHDZipI-1-7e-1At5g15150ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)C.G.S.X.
0.064e-754Vitis vinifera1621556_s_atCB980317hypothetical protein LOC100246330 /// hypothetical protein LOC100266521-2e-4At2g22430ATHB6C.G.S.X.
0.034e-548Zea maysZm.4511.1.S1_atAI734516hypothetical protein LOC100272620-3e-4At2g18550HB-2 (HOMEOBOX-2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
LGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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