Gene omics information

Query gene ID At2g17840
Gene name ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8089.8At2g17840816293ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7)Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis.S.X.H.G.
1.00100.0At1g20450838633ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10)Encodes a gene induced by low temperature and dehydration. Inhibits e.coli growth while overexpressed. Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer cold tolerance. Localized to membranes and cytoplasm.S.X.H.G.
0.6781.6At1g20440838632COR47 (COLD-REGULATED 47)Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. Cold regulated gene, amino acid sequence homology with Group II LEA (late embryogenesis abundant) proteins. Also responds to osmotic stress, ABA, dehydration and inhibits e.coli growth while overexpressed. COR47 and RAB18 double overexpressor plants are cold tolerant.S.X.H.G.
0.6781.6At2g23120816844-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PS.X.H.G.
0.5773.8At1g01470837071LEA14 (LATE EMBRYOGENESIS ABUNDANT 14)Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
43.299.8GSM184914Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
41.899.8E-MEXP-98-raw-cel-320188694
41.099.8E-MEXP-98-raw-cel-320189024
40.499.8E-MEXP-98-raw-cel-320188804
36.999.7E-MEXP-98-raw-cel-320188749
36.599.7GSM128713Thorlby_1-2_3h-post-freeze_REP3_ATH1GSE5524Gene Expression During Recovery from Freezing
36.099.7GSM142851MG001_ATH1_A4-Torres-2N1GSE6176Impact of Type III effectors on plant defense responses
34.799.7GSM131279AtGen_6-1611_Cold(4°C)-Shoots-24.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
34.699.7GSM269823T6 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
32.999.7GSM131117AtGen_B-3_1-3-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.436e-29129At4g35985829753senescence/dehydration-associated protein-relatedF:unknown;P:unknown;C:chloroplast;MPFOC.G.S.X.
0.157e-756At3g51250824288senescence/dehydration-associated protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOBC.G.S.X.
0.012e-138At4g27110828819COBL11 (COBRA-LIKE PROTEIN 11 PRECURSOR)F:unknown;P:biological_process unknown;C:anchored to membrane;PC.G.S.X.
0.017e-136At5g40540834052protein kinase, putativeF:protein serine/threonine/tyrosine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.017e-136At4g18600827594WAVE5Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments.C.G.S.X.
0.007e-136At4g38780830033splicing factor, putativeF:molecular_function unknown;P:nuclear mRNA splicing, via spliceosome;C:spliceosome;MOFPBC.G.S.X.
0.017e-136At3g27730822395RCK (ROCK-N-ROLLERS)DNA helicase required for interference-sensitive meiotic crossover events.C.G.S.X.
0.027e-136At3g46300823775unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.017e-136At3g16260820872TRZ4 (TRNASE Z 4)Encodes a tRNase Z.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.123e-1067Glycine maxGma.7526.1.A1_atBU548355--3e-7At4g35985senescence/dehydration-associated protein-relatedC.G.S.X.
0.059e-857Hordeum vulgareContig9738_atContig9738--6e-9At3g51250senescence/dehydration-associated protein-relatedC.G.S.X.
0.011e+036Oryza sativaOs03g0268400AK121972.1-Mannose-1-phosphate guanyltransferase (EC2.7.7.13) (ATP-mannose-1- phosphate guanylyltransferase)(GDP-mannose pyrophosphorylase) (NDP- hexosepyrophosphorylase)3e-28At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)C.G.S.X.
0.235e-1583Populus trichocarpaPtpAffx.221963.1.S1_s_atpmrna39099hypothetical protein-4e-15At2g17840ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7)C.G.S.X.
0.067e-136Triticum aestivumTa.21557.1.A1_atCA696027--4e-1At2g17840ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7)C.G.S.X.
0.116e-1167Vitis vinifera1620878_atCF202635.1--5e-10At3g51250senescence/dehydration-associated protein-relatedC.G.S.X.
0.022e-240Zea maysZmAffx.286.1.A1_atAI670419--2e-1At1g07745RAD51D (ARABIDOPSIS HOMOLOG OF RAD51 D)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009414A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
XGO:0009409A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
XGO:0009644A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high light intensity stimulus.
XGO:0009651A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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