CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g17800

Gene name ARAC1

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.40 50.8 At2g17800 816290 ARAC1 A member of ROP GTPase family. Rac-like GTP-binding protein ARAC1/ATGP2. Encodes a geranylgeranylated GTP binding protein. Involved in the auxin-activated 26S proteasome-dependent Aux/IAA proteolysis pathway. S.X. H.G.
0.67 81.6 At4g23490 828447 fringe-related protein F:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:cellular_component unknown;MFPO S.X. H.G.
0.67 81.6 At4g35950 829750 ARAC6 (ARABIDOPSIS RAC-LIKE 6) A member of ROP GTPases gene family-like. GTP binding protein Arac6. S.X. H.G.
0.57 73.8 At3g61590 825332 HWS (HAWAIIAN SKIRT) F:ubiquitin-protein ligase activity;P:organ development;C:cellular_component unknown;P S.X. H.G.
0.50 65.3 At3g46200 823765 aTNUDT9 (Arabidopsis thaliana Nudix hydrolase homolog 9) F:hydrolase activity;P:biological_process unknown;C:cytosol;MPO S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
46.4 99.8 GSM142736 DH001_ATH1_A3-TCP1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
40.8 99.8 GSM142735 DH001_ATH1_A2-BCP1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
34.4 99.7 GSM142734 DH001_ATH1_A1-UNM1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
31.3 99.7 GSM142739 DH001_ATH1_A6-TCP2 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
24.5 99.6 GSM133759 Lindsey_1-9_heart-stage-cotyledon_Rep3_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
24.2 99.6 E-MEXP-1138-raw-cel-1432773066
24.1 99.6 E-MEXP-1138-raw-cel-1432773322
23.1 99.6 E-MEXP-1138-raw-cel-1432773258
20.8 99.6 GSM142737 DH001_ATH1_A4-UNM2 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
20.5 99.6 GSM142738 DH001_ATH1_A5-BCP2 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.82 0 650 At4g35950 829750 ARAC6 (ARABIDOPSIS RAC-LIKE 6) A member of ROP GTPases gene family-like. GTP binding protein Arac6. C.G. S.X.
0.75 5e-111 400 At3g51300 824293 ROP1 (RHO-RELATED PROTEIN FROM PLANTS 1) Encodes a pollen-specific Rop GTPase, member of the Rho family of small GTP binding proteins that interacts with RIC3 and RIC4 to control tip growth in pollen tubes. These three proteins promote the proper targeting of exocytic vesicles in the pollen tube tip. ROP1 activity is regulated by the REN1 GTPase activator protein. C.G. S.X.
0.63 5e-80 297 At1g75840 843917 ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5) Belongs to the plant-specific ROP group of Rho GTPases; localized to the plasma membrane of tips of root hairs; involved in polar growth control. C.G. S.X.
0.70 1e-77 289 At1g20090 838598 ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2) Member of the Rho GTPase family. Functions to organize the microtubular cytoskeleton in combination with RIC1 and RIC4. These interactions affect pavement cell morphogenesis and pollen tube growth. ROP2 expression is stimulated by brassinosteroid treatment. Inhibit light-induced stomatal opening. C.G. S.X.
0.69 3e-38 159 At4g35020 829654 ARAC3 (ARABIDOPSIS RAC-LIKE 3) A member of ROP GTPase gene family; Encodes a Rho-like GTP binding protein. C.G. S.X.
0.49 2e-23 109 At5g45970 834637 ARAC2 (ARABIDOPSIS RAC-LIKE 2) Encodes a Rac-like protein ARAC2. A member of ROP GTPase gene family. C.G. S.X.
0.40 6e-18 91 At5g62880 836408 ARAC10 A member of ROP GTPase gene family. C.G. S.X.
0.24 1e-12 73 At2g44690 819077 ARAC9 A member of ROP GTPase gene family. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.51 2e-49 196 Glycine max GmaAffx.92012.1.S1_at CF807737 - - 4e-81 At1g75840 ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5) C.G. S.X.
0.35 6e-44 176 Hordeum vulgare Contig5202_at Contig5202 - - 2e-62 At1g20090 ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2) C.G. S.X.
0.44 2e-28 127 Oryza sativa Os02g0834000 AF218381.1 - Rop4 small GTP binding protein 1e-72 At4g35020 ARAC3 (ARABIDOPSIS RAC-LIKE 3) C.G. S.X.
0.51 9e-101 367 Populus trichocarpa Ptp.2292.1.A1_at CV232695 hypothetical protein - 4e-125 At4g35950 ARAC6 (ARABIDOPSIS RAC-LIKE 6) C.G. S.X.
0.33 2e-14 79 Triticum aestivum TaAffx.8670.1.S1_at CA621785 - - 6e-27 At4g35020 ARAC3 (ARABIDOPSIS RAC-LIKE 3) C.G. S.X.
0.50 1e-53 208 Vitis vinifera 1606720_at CD800244 hypothetical protein LOC100253703 - 8e-111 At1g20090 ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2) C.G. S.X.
0.35 1e-32 139 Zea mays Zm.15819.1.A1_at AY163377.1 Rho-related protein from plants 9 - 3e-46 At4g35950 ARAC6 (ARABIDOPSIS RAC-LIKE 6) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009734 The series of molecular signals generated in response to detection of auxin.
S GO:0009738 A series of molecular signals mediated by the detection of abscisic acid.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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