CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g17740

Gene name DC1 domain-containing protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.73 85.5 At2g17740 816283 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;PO S.X. H.G.
0.75 86.9 At2g43620 818964 chitinase, putative F:chitin binding, chitinase activity;P:response to salt stress;C:apoplast;PBFOVM S.X. H.G.
0.67 81.6 At1g49000 841322 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P S.X. H.G.
0.60 75.7 At2g19190 816436 FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1) Receptor-like protein kinase. Involved in early defense signaling. S.X. H.G.
0.50 65.3 At4g22470 828342 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;MBOPFVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
273.6 100.0 E-MEXP-1094-raw-cel-1379507313
229.6 100.0 E-MEXP-1094-raw-cel-1379507273
172.8 100.0 GSM131111 AtGen_B-39_3-4-4_REP3_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
168.3 100.0 GSM131139 AtGen_B-25_2-4-4_REP2_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
164.4 100.0 GSM128686 Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
155.6 99.9 E-MEXP-1094-raw-cel-1379507513
155.3 99.9 E-NASC-76-raw-cel-1359878900
148.9 99.9 E-NASC-76-raw-cel-1359879158
148.1 99.9 E-NASC-76-raw-cel-1359878976
146.7 99.9 E-MEXP-1094-raw-cel-1379507553
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.50 2e-82 305 At2g44370 819044 DC1 domain-containing protein F:unknown;P:unknown;C:unknown;POMF C.G. S.X.
0.20 8e-27 121 At2g28270 817373 DC1 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO C.G. S.X.
0.31 2e-21 103 At5g40590 834057 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;POF C.G. S.X.
0.23 4e-16 85 At2g44380 819045 DC1 domain-containing protein F:unknown;P:unknown;C:unknown;PMO C.G. S.X.
0.05 1e-10 67 At5g43520 834372 DC1 domain-containing protein F:unknown;P:unknown;C:unknown;POMF C.G. S.X.
0.06 2e-9 63 At2g44390 819046 DC1 domain-containing protein F:unknown;P:unknown;C:unknown;PO C.G. S.X.
0.01 9e-2 38 At4g21180 827866 ATERDJ2B J domain protein localized in ER membrane. C.G. S.X.
0.02 4e-1 36 At5g39990 833996 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein F:acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:membrane;MPBVO C.G. S.X.
0.02 1e+0 34 At5g65230 836648 AtMYB53 (myb domain protein 53) Member of the R2R3 factor gene family. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e+0 32 Glycine max PsAffx.C138000010_at PsAffx.C138000010 - - 1e+0 At5g59310 LTP4 (LIPID TRANSFER PROTEIN 4) C.G. S.X.
0.02 3e+0 32 Hordeum vulgare Contig5503_s_at Contig5503 - - 2e-8 At1g21410 SKP2A C.G. S.X.
0.03 3e+0 34 Oryza sativa OsAffx.9214.1.S1_x_at - - - 0 C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.31172.1.A1_at CV244480 hypothetical protein - 1e-3 At1g06010 unknown protein C.G. S.X.
0.04 3e-2 40 Triticum aestivum TaAffx.108642.1.S1_at CA685925 - - 5e-3 At2g17740 DC1 domain-containing protein C.G. S.X.
0.03 4e-1 34 Vitis vinifera 1619906_at CK138175.1 hypothetical protein LOC100241815 - 6e-2 At3g49845 - C.G. S.X.
0.03 2e-1 36 Zea mays Zm.12940.1.S1_at AY104675.1 - - 7e+0 At4g24972 TPD1 (TAPETUM DETERMINANT 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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