CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g17660

Gene name nitrate-responsive NOI protein, putative

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.88 94.0 At2g17660 816273 nitrate-responsive NOI protein, putative F:molecular_function unknown;P:response to nitrate;C:cellular_component unknown;PO S.X. H.G.
0.95 97.0 At5g66620 836794 DAR6 (DA1-RELATED PROTEIN 6) F:zinc ion binding;P:unknown;C:unknown;MOBFPVA S.X. H.G.
0.90 95.1 At4g26200 828726 ACS7 Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA. S.X. H.G.
0.90 95.1 At1g33760 840267 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. S.X. H.G.
0.90 95.1 At1g61460 842440 S-locus protein kinase, putative F:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:unknown;MPOBFVA S.X. H.G.
0.85 92.4 At1g22810 838887 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. S.X. H.G.
0.84 91.9 At2g27320 817275 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PFB S.X. H.G.
0.84 91.9 At2g31690 817725 lipase class 3 family protein encodes a triacylglycerol lipase located in plastoglobuli and involved in the degradation of triacylglycerol. It also has impact on leaf senescence and maintaining the structural integrity of thylakoids. S.X. H.G.
0.84 91.9 At4g37770 829933 ACS8 Encodes an auxin inducible ACC synthase. S.X. H.G.
0.84 91.9 At1g30370 839917 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:unknown;PBOFMV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
757.1 100.0 E-MEXP-807-raw-cel-1173273060
449.1 100.0 E-MEXP-807-raw-cel-1173273196
413.5 100.0 E-MEXP-807-raw-cel-1173273088
331.0 100.0 E-MEXP-807-raw-cel-1173273170
326.2 100.0 E-MEXP-807-raw-cel-1173273144
245.8 100.0 E-MEXP-807-raw-cel-1173273252
228.8 100.0 E-MEXP-807-raw-cel-1173273223
217.4 100.0 GSM154507 Arabidopsis growing pollen tubes rep1 GSE6696 Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
199.3 100.0 E-MEXP-807-raw-cel-1173273116
167.2 100.0 GSM154508 Arabidopsis growing pollen tubes rep2 GSE6696 Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.71 2e-21 101 At4g35655 5008182 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.13 2e-6 52 At5g55850 835679 NOI NOI protein C.G. S.X.
0.27 6e-3 40 At5g63270 836447 nitrate-responsive NOI protein, putative F:molecular_function unknown;P:response to nitrate;C:cellular_component unknown;PO C.G. S.X.
0.10 3e-2 38 At3g48450 824004 nitrate-responsive NOI protein, putative F:molecular_function unknown;P:response to nitrate;C:cellular_component unknown;PO C.G. S.X.
0.02 4e-1 34 At1g09900 837522 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:membrane;POMFBA C.G. S.X.
0.02 2e+0 32 At4g15820 827263 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBV C.G. S.X.
0.00 2e+0 32 At4g02660 828210 WD-40 repeat family protein / beige-related F:binding;P:signal transduction;C:chloroplast;MBOFPA C.G. S.X.
0.01 2e+0 32 At4g20400 827788 transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein F:transcription factor activity;P:regulation of transcription;C:nucleus;MFPO C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 2e+0 32 Glycine max GmaAffx.3553.1.S1_at AW423878 - - 2e-2 At5g55850 NOI C.G. S.X.
0.07 5e-2 36 Hordeum vulgare Contig3644_s_at Contig3644 - - 5e-9 At5g55850 NOI C.G. S.X.
0.18 2e-7 56 Oryza sativa OsAffx.27689.1.S1_at - - - 0 C.G. S.X.
0.11 9e-3 40 Populus trichocarpa PtpAffx.41966.1.S1_at CK113682 - - 5e-3 At5g40645 nitrate-responsive NOI protein, putative C.G. S.X.
0.13 2e-3 42 Triticum aestivum TaAffx.85565.1.S1_at CA621671 - - 2e-8 At2g04410 - C.G. S.X.
0.06 2e+0 30 Vitis vinifera 1612136_at CF514670 - - 3e-17 At5g55850 NOI C.G. S.X.
0.08 2e-4 44 Zea mays Zm.10750.1.A1_at AY104853.1 nitrate-induced NOI protein - 9e-12 At2g04410 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0010167 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrate stimulus.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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