Gene omics information

Query gene ID At2g17440
Gene name leucine-rich repeat family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4253.9At2g17440816250leucine-rich repeat family proteinF:protein binding;P:unknown;C:plasma membrane;MPBOFVAS.X.H.G.
0.5974.7At1g03220838517extracellular dermal glycoprotein, putative / EDGP, putativeF:aspartic-type endopeptidase activity;P:response to salt stress;C:cell wall, plasma membrane, membrane, plant-type cell wall;PS.X.H.G.
0.4050.8At2g36380818211PDR6F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPVS.X.H.G.
0.3338.1At1g70300843366KUP6potassium transporterS.X.H.G.
0.3133.8At3g16460820894jacalin lectin family proteinF:copper ion binding;P:response to cold;C:cytosol, nucleus, membrane;BOMPFVAS.X.H.G.
0.2830.3At1g78660844202gamma-glutamyl hydrolase, putative / gamma-Glu-X carboxypeptidase, putative / conjugase, putativeThe Arabidopsis protein AtGGH1 is a gamma-glutamyl hydrolase cleaving pentaglutamates to yield di- and triglutamates. The enzyme is involved in the tetrahydrofolate metabolism and located to the vacuole.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
40.299.8GSM290758root - 01% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
38.199.8GSM184909Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
37.999.8GSM179960Arabidopsis roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
30.299.7GSM291119root - 21% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
28.499.7GSM291024root - 08% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
28.199.7GSM179958Arabidopsis roots, air treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
27.899.7GSM179961Arabidopsis roots, ethylene treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
26.499.7GSM184897Arabidopsis, root cells, cortex, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
26.499.7GSM179970Arabidopsis aux1 mutant roots, ethylene treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
26.299.7GSM179969Arabidopsis aux1 mutant roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.501e-91337At4g35470829699leucine-rich repeat family proteinF:protein binding;P:biological_process unknown;C:plasma membrane;MPBOFAVC.G.S.X.
0.012e-138At5g65250836650unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;BMPOC.G.S.X.
0.012e-138At1g76990844035ACR3F:amino acid binding;P:nitrogen compound metabolic process, metabolic process;C:cytosol;BOPC.G.S.X.
0.018e-136At5g07180830609ERL2 (ERECTA-LIKE 2)Encodes a receptor-like kinase that, together with ER and ERL1 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is also important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. When heterozygous in an er/erl1 null background, plants are female sterile due to cell division defect in the integuments.C.G.S.X.
0.018e-136At5g66860836820-F:unknown;P:translation;C:mitochondrion;OBPC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.072e-242Glycine maxGmaAffx.46385.2.S1_atCA801989--4e-28At4g35470leucine-rich repeat family proteinC.G.S.X.
0.043e-240Hordeum vulgareContig11084_atContig11084--2e-4At4g35470leucine-rich repeat family proteinC.G.S.X.
0.051e-140Oryza sativaOs08g0511700AK065422.1-Leucine-rich repeat, typical subtype containingprotein2e-4At4g35470leucine-rich repeat family proteinC.G.S.X.
0.165e-1273Populus trichocarpaPtpAffx.205285.1.S1_atpmrna10476hypothetical protein-3e-19At4g35470leucine-rich repeat family proteinC.G.S.X.
0.048e-136Triticum aestivumTaAffx.9110.1.S1_atCA612098--4e+0At1g55615unknown proteinC.G.S.X.
0.022e-136Vitis vinifera1610450_atCD717368--1e+0At1g76955Expressed proteinC.G.S.X.
0.023e-136Zea maysZm.16268.1.A1_atCO526317hypothetical protein LOC100272929-1e+0At2g45660AGL20 (AGAMOUS-LIKE 20)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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