Gene omics information

Query gene ID At2g17060
Gene name disease resistance protein (TIR-NBS-LRR class), putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5673.0At2g17060816211disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVS.X.H.G.
0.7385.5At4g11230826725respiratory burst oxidase, putative / NADPH oxidase, putativeF:in 6 functions;P:oxidation reduction;C:integral to membrane, membrane;MFPBOAS.X.H.G.
0.6882.2At3g46730823826disease resistance protein (CC-NBS class), putativeF:ATP binding;P:defense response, apoptosis;C:endomembrane system;PMBOFAS.X.H.G.
0.6781.6At3g45330823671lectin protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.6579.6At1g61480842442S-locus protein kinase, putativeF:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAS.X.H.G.
0.6478.9At1g79320844270AtMC6 (metacaspase 6)F:cysteine-type endopeptidase activity;P:proteolysis;C:cellular_component unknown;BOFPAS.X.H.G.
0.6478.9At4g15740827252C2 domain-containing proteinF:unknown;P:unknown;C:cellular_component unknown;PMFOS.X.H.G.
0.6478.9At2g28970817446leucine-rich repeat protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.5974.7At1g18860838467WRKY61member of WRKY Transcription Factor; Group II-bS.X.H.G.
0.5873.8At5g59260836044lectin protein kinase, putativeF:protein serine/threonine kinase activity, sugar binding, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
623.5100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
301.1100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
202.4100.0GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
171.0100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
160.399.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
142.899.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
141.499.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
138.999.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
126.099.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
121.999.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.049e-1893At5g45250834561RPS4 (RESISTANT TO P. SYRINGAE 4)RPS4 belongs to the Toll/interleukin-1 receptor (TIR)-nucleotide binding site (NBS)-Leu-rich repeat (LRR) class of disease resistance (R ) genes. Confers specific resistance to Pseudomonas syringae pv. tomato carrying the avirulence gene AvrRPS4. Produces alternative transcripts with truncated open reading frames.C.G.S.X.
0.082e-656At5g45230834559disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVC.G.S.X.
0.072e-656At4g36150829772disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PMBOFAVC.G.S.X.
0.038e-654At5g45060834537disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAC.G.S.X.
0.063e-552At4g19530827695disease resistance protein (TIR-NBS-LRR class), putativeEncodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death.C.G.S.X.
0.021e-450At5g45070834538AtPP2-A8 (Phloem protein 2-A8)F:carbohydrate binding;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PC.G.S.X.
0.012e-346At4g12010826809disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVC.G.S.X.
0.032e-346At2g03030814832Toll-Interleukin-Resistance (TIR) domain-containing proteinF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBOC.G.S.X.
0.032e-346At2g03300814859Toll-Interleukin-Resistance (TIR) domain-containing proteinF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e-140Glycine maxGmaAffx.59681.1.S1_atBI945130--3e+0At5g46690bHLH071 (beta HLH protein 71)C.G.S.X.
0.012e-138Hordeum vulgareHVSMEk0005B15r2_atHVSMEk0005B15r2--1e+0At5g43520DC1 domain-containing proteinC.G.S.X.
0.019e-138Oryza sativaOs09g01131009637.m00098--2e-4At4g26530fructose-bisphosphate aldolase, putativeC.G.S.X.
0.012e-140Populus trichocarpaPtpAffx.105282.1.S1_atCK107491hypothetical protein-3e-1At3g26110-C.G.S.X.
0.015e-138Triticum aestivumTa.7841.2.S1_atBQ160782--1e-1At3g22920peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putativeC.G.S.X.
0.011e-138Vitis vinifera1621787_atAY427122.1--1e-1At5g41600BTI3 (VIRB2-INTERACTING PROTEIN 3)C.G.S.X.
0.011e+132Zea maysZm.7512.1.A1_x_atCF062696--2e-7At3g20260structural constituent of ribosomeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
LGO:0006915A form of programmed cell death that begins when a cell receives internal or external signals that trigger the activity of proteolytic caspases, proceeds through a series of characteristic stages typically including rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), and plasma membrane blebbing (but maintenance of its integrity until the final stages of the process), and ends with the death of the cell.
LGO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
LGO:0045087Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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