Gene omics information

Query gene ID At2g16990
Gene name tetracycline transporter
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2217.5At2g16990816202tetracycline transporterF:tetracycline transporter activity;P:unknown;C:endomembrane system;BOMPFAS.X.H.G.
0.4659.8At5g15190831371unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
0.3338.1At4g16750827379DRE-binding transcription factor, putativeencodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.S.X.H.G.
0.071.9At4g24010828501ATCSLG1encodes a protein similar to cellulose synthaseS.X.H.G.
0.071.9At5g01520831747zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MOPVFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
241.7100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
130.699.9GSM269813WT leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
124.499.9GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
117.099.9GSM269825T8 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
110.299.9GSM269819C2 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
103.599.9GSM269831T6 leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
101.199.9GSM269817T8 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
99.599.9GSM269823T6 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
84.399.9GSM269829WT leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
66.199.8GSM269833T8 leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.412e-29131At2g16980816201tetracycline transporterF:tetracycline transporter activity;P:response to antibiotic, tetracycline transport;C:endomembrane system, integral to membrane;BOMPAFC.G.S.X.
0.421e-20101At2g16970816200MEE15 (maternal effect embryo arrest 15)F:tetracycline transporter activity;P:embryonic development ending in seed dormancy;C:integral to membrane;BOMPC.G.S.X.
0.011e-242At3g46600823813scarecrow transcription factor family proteinF:transcription factor activity;P:response to chitin, regulation of transcription;C:cellular_component unknown;PBMC.G.S.X.
0.024e-240At3g07220819910transcriptional activator, putativeF:transcription activator activity;P:biological_process unknown;C:cellular_component unknown;FMPOC.G.S.X.
0.022e-138At5g27990832869unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-138Glycine maxGmaAffx.86158.1.S1_atBE806262--9e-2At2g16990tetracycline transporterC.G.S.X.
0.023e-136Hordeum vulgareContig24772_atContig24772--1e-4At5g63740zinc finger protein-relatedC.G.S.X.
0.022e-242Oryza sativaOs.2813.1.S1_at---0C.G.S.X.
0.051e-242Populus trichocarpaPtpAffx.25650.3.S1_atCV254559hypothetical protein-3e-3At2g16990tetracycline transporterC.G.S.X.
0.024e-240Triticum aestivumTa.5278.2.S1_atCA598996--2e-2At2g16990tetracycline transporterC.G.S.X.
0.022e-136Vitis vinifera1608560_atCF405443hypothetical protein LOC100250989-3e+0At3g09890ankyrin repeat family proteinC.G.S.X.
0.021e+034Zea maysZm.7040.1.S1_x_atT18692--9e-18At5g49910CPHSC70-2EAT SHOCK PROTEIN 70-2 (CHLOROPLAST HEAT SHOCK PROTEIN 70-2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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