Gene omics information

Query gene ID At2g16700
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g16700816171ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)Encodes actin depolymerizing factor 5 (ADF5).S.X.H.G.
0.4050.8At5g27830832845-F:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;MOPS.X.H.G.
0.3846.7At5g04260830305WCRKC2 (WCRKC THIOREDOXIN 2)Encodes a thioredoxin (WCRKC2) localized in chloroplast stroma. Contains a WCRKC motif.S.X.H.G.
0.3643.6At4g34120829558LEJ1 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 1)F:molecular_function unknown;P:biological_process unknown;C:chloroplast stroma, chloroplast;BAOPMFS.X.H.G.
0.061.4At3g57090824876BIGYINEncodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division.S.X.H.G.
0.061.4At2g16600816161ROC3Encodes cytosolic cyclophilin ROC3.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
32.899.7GSM131277AtGen_6-1521_Cold(4°C)-Roots-12.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
30.199.7GSM131281AtGen_6-1621_Cold(4°C)-Roots-24.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
30.099.7GSM131282AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)
25.799.7GSM74909ice1_24H Cold_Rep2GSE3326ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
25.699.7GSM131278AtGen_6-1522_Cold(4°C)-Roots-12.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)
23.099.6GSM74908ice1_24H Cold_Rep1GSE3326ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
19.699.6GSM133821Yang_1-6_old-pod_Rep3_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thaliana
19.499.6GSM134423St.Clair_1-120_434_Van-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0
17.699.5GSM131276AtGen_6-1512_Cold(4°C)-Shoots-12.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.804e-55214At4g34970829649ADF9 (ACTIN DEPOLYMERIZING FACTOR 9)F:actin binding;P:biological_process unknown;C:intracellular;MPOFC.G.S.X.
0.221e-1479At3g46000823743ADF2 (ACTIN DEPOLYMERIZING FACTOR 2)Encodes depolymerizing factor 2.C.G.S.X.
0.084e-961At5g52360835312ADF10 (ACTIN DEPOLYMERIZING FACTOR 10)F:actin binding;P:biological_process unknown;C:intracellular;MPOFC.G.S.X.
0.131e-859At5g59890836111ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)actin depolymerizing factor 4 (ADF4) mRNA, complete cdsC.G.S.X.
0.072e-756At4g25590828664ADF7 (actin depolymerizing factor 7)F:actin binding;P:biological_process unknown;C:intracellular;MPOFC.G.S.X.
0.073e-652At2g31200817676ADF6 (ACTIN DEPOLYMERIZING FACTOR 6)Encodes actin depolymerizing factor 6 (ADF6).C.G.S.X.
0.083e-342At1g01750839281ADF11 (ACTIN DEPOLYMERIZING FACTOR 11)F:actin binding;P:biological_process unknown;C:intracellular;MPOFBC.G.S.X.
0.071e-240At4g00680828037ADF8 (ACTIN DEPOLYMERIZING FACTOR 8)F:actin binding;P:biological_process unknown;C:intracellular;MPOFBC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.444e-31135Glycine maxGmaAffx.54969.1.S1_atBQ576564--6e-31At2g16700ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)C.G.S.X.
0.193e-2097Hordeum vulgareContig5692_s_atContig5692--6e-12At4g34970ADF9 (ACTIN DEPOLYMERIZING FACTOR 9)C.G.S.X.
0.181e-1687Oryza sativaOs03g0243100AK104056.1-Actin-depolymerizing factor 5 (ADF-5) (AtADF5)2e-16At2g16700ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)C.G.S.X.
0.474e-31135Populus trichocarpaPtpAffx.57531.1.A1_atCV264188hypothetical protein-5e-31At2g16700ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)C.G.S.X.
0.106e-548Triticum aestivumTa.5577.2.S1_atCA624616--8e-14At3g46000ADF2 (ACTIN DEPOLYMERIZING FACTOR 2)C.G.S.X.
0.121e-342Vitis vinifera1618754_atCF203233.1hypothetical protein LOC100263646-5e-31At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)C.G.S.X.
0.193e-2097Zea maysZm.1019.1.A1_atAW288674actin-depolymerizing factor 5-2e-19At2g16700ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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