Gene omics information

Query gene ID At2g15740
Gene name zinc finger (C2H2 type) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g15740816068zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;POMS.X.H.G.
0.8290.9At1g20690838657-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7888.6At3g21410821695F-box family protein (FBW1)F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:endomembrane system;POS.X.H.G.
0.7486.1At4g05630825935unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7385.5At2g24880817025self-incompatibility protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.7083.5At3g14480820671glycine/proline-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPBOFVAS.X.H.G.
0.6882.2At1g64030842706serpin family protein / serine protease inhibitor family proteinF:serine-type endopeptidase inhibitor activity;P:biological_process unknown;C:cellular_component unknown;MVPBOAFS.X.H.G.
0.6781.6At5g26250832694sugar transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:endomembrane system, integral to membrane, membrane;BFMPOAS.X.H.G.
0.6680.1At4g12140826822zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVS.X.H.G.
0.6680.1At3g11750820348dihydroneopterin aldolase, putativeF:dihydroneopterin aldolase activity;P:folic acid and derivative metabolic process;C:unknown;BOPAFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
536.5100.0GSM284394Arabidopsis GCE3GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
482.5100.0GSM284392Arabidopsis GCE1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
444.1100.0GSM311280Laser capture microdissected (LCM) chalazal endosperm at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
253.8100.0GSM311279Laser capture microdissected (LCM) chalazal endosperm at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
166.0100.0GSM284393Arabidopsis GCE2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
163.699.9GSM311291Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
118.299.9GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
108.299.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
106.199.9GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
102.399.9GSM311292Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.604e-91335At2g18490816364zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;POC.G.S.X.
0.493e-30133At5g42640834272zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PMC.G.S.X.
0.131e-1377At5g22990832363zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PMOC.G.S.X.
0.021e-138At3g29360822594UDP-glucose 6-dehydrogenase, putativeF:in 6 functions;P:metabolic process;C:cytosol, nucleus;OBAMPFVC.G.S.X.
0.011e-138At1g11350837677SD1-13 (S-DOMAIN-1 13)F:protein serine/threonine kinase activity, protein kinase activity, kinase activity;P:protein amino acid autophosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.015e-136At5g59670836088leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
0.015e-136At2g16640816165TOC132 (MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132)F:transmembrane receptor activity;P:protein targeting to chloroplast;C:chloroplast outer membrane, membrane;OMFBPVAC.G.S.X.
0.035e-136At1g668553767652-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-242Glycine maxGmaAffx.51876.1.S1_atBU926691--8e-1At4g28365plastocyanin-like domain-containing proteinC.G.S.X.
0.032e-136Hordeum vulgareContig4415_atContig4415--3e-1At2g18490zinc finger (C2H2 type) family proteinC.G.S.X.
0.032e-138Oryza sativaOs02g0106600AK107830.1-Zn-finger, RING domain containing protein7e+0Atmg01350-C.G.S.X.
0.032e-138Populus trichocarpaPtpAffx.69308.1.A1_atCV265598--6e-2At2g15740zinc finger (C2H2 type) family proteinC.G.S.X.
0.022e+034Triticum aestivumTaAffx.6491.1.S1_atCA684954--4e+0At3g43480-C.G.S.X.
0.036e-134Vitis vinifera1622591_atCB981129hypothetical protein LOC100253642-1e-3At5g51480SKS2 (SKU5 SIMILAR 2)C.G.S.X.
0.023e+032Zea maysZm.6456.2.A1_atAI691816--3e+0At3g21590-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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