Gene omics information

Query gene ID At2g15670
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4253.9At2g15670816060-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4050.8At1g74620843801zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVS.X.H.G.
0.3032.1At3g42600823272transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.2522.6At4g35170829670-F:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.2420.7At1g475203767382transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
397.9100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
355.3100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
343.8100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
194.5100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
180.8100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
170.5100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
164.5100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
164.099.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
159.299.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
145.499.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.152e-27123At3g51670824330SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinF:transporter activity;P:transport;C:plasma membrane;MFPOC.G.S.X.
0.151e-1583At3g46300823775unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.022e-240At4g19230827663CYP707A1Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.C.G.S.X.
0.033e-136At3g07500819938far-red impaired responsive family protein / FAR1 family proteinF:molecular_function unknown;P:response to red or far red light;C:cellular_component unknown;PC.G.S.X.
0.011e+034At5g46260834668disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFVAC.G.S.X.
0.011e+034At4g21150827863HAP6 (HAPLESS 6)F:dolichyl-diphosphooligosaccharide-protein glycotransferase activity;P:protein amino acid terminal N-glycosylation, response to cold;C:in 6 components;MFPOC.G.S.X.
0.031e+034At1g49560841380myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POC.G.S.X.
0.014e+032At5g15540831407EMB2773 (EMBRYO DEFECTIVE 2773)Encodes Adherin SCC2. Essential for viability. Required for normal seed development. Plays a role in the establishment of sister-chromatid cohesion and chromosome organization during meiosis.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-344Glycine maxGma.2058.1.S1_atCD392910--2e-35At3g51670SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinC.G.S.X.
0.031e-136Hordeum vulgareHI05P18u_s_atHI05P18u--4e+0At3g50695unknown proteinC.G.S.X.
0.022e+034Oryza sativaOs10g0166300AK102437.1--2e+0At3g44620protein tyrosine phosphataseC.G.S.X.
0.051e-448Populus trichocarpaPtp.5228.1.S1_atBU836749hypothetical protein-4e-32At3g51670SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinC.G.S.X.
0.045e+032Triticum aestivumTaAffx.54523.1.S1_atCA680501--9e-2Atmg00710-C.G.S.X.
0.059e-546Vitis vinifera1609486_atCF207907hypothetical protein LOC100246625-7e-47At3g51670SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinC.G.S.X.
0.038e+030Zea maysZmAffx.1536.1.S1_at40794996-127--1e+1At3g61390U-box domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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