CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g14910

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.76 87.4 At2g14910 815980 unknown protein F:unknown;P:unknown;C:chloroplast;BOPM S.X. H.G.
0.48 62.5 At2g01620 814691 MEE11 (maternal effect embryo arrest 11) F:unknown;P:embryonic development ending in seed dormancy;C:unknown;MPO S.X. H.G.
0.45 58.3 At2g42590 818859 GRF9 (GENERAL REGULATORY FACTOR 9) 14-3-3 gene. Binds calcium and displays induced structural changes. S.X. H.G.
0.44 57.2 At2g34310 817992 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPB S.X. H.G.
0.44 57.2 At2g20725 816602 CAAX amino terminal protease family protein F:molecular_function unknown;P:proteolysis;C:chloroplast, membrane;BOPA S.X. H.G.
0.44 57.2 At5g33280 833300 chloride channel-like (CLC) protein, putative F:anion channel activity, voltage-gated chloride channel activity;P:chloride transport;C:intracellular, membrane;BMOFPA S.X. H.G.
0.44 57.2 At5g51020 835175 CRL (CRUMPLED LEAF) Encodes CRL (CRUMPLED LEAF), a protein localized in the outer envelope membrane of plastids. Mutation in this gene affects the pattern of cell division, cell differentiation and plastid division. S.X. H.G.
0.43 55.3 At5g49940 835057 NFU2 (NIFU-LIKE PROTEIN 2) Encodes a protein containing the NFU domain and functions as a molecular scaffold for iron-sulfur cluster assembly and delivery. Homologous to the cyanobacterial CNFU protein and is targeted to the chloroplast. S.X. H.G.
0.42 53.9 At3g26085 822206 CAAX amino terminal protease family protein F:molecular_function unknown;P:proteolysis;C:membrane;BOPA S.X. H.G.
0.42 53.9 At4g35760 829729 - F:unknown;P:unknown;C:chloroplast;OBP S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.7 99.5 E-TABM-63-raw-cel-681137124
15.2 99.4 GSM139897 WT_non-polysome_rep2 GSE6024 eif3h/WT polysome loading
13.1 99.4 E-TABM-63-raw-cel-681137195
12.8 99.3 E-TABM-63-raw-cel-681137052
11.6 99.3 GSM133117 RIKEN-YAMAUCHI1A GSE5687 AtGenExpress: Different temperature treatment of seeds
11.4 99.3 E-TABM-63-raw-cel-681137015
9.4 99.1 GSM128649 Underwood_1-2_Cor-10e6-24h_Rep2_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
9.1 99.1 GSM128667 Underwood_1-20_Mock-Inoculum-10h_Rep2_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
8.2 99.0 GSM128655 Underwood_1-8_DC3000-10e6-24h_Rep2_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
7.4 98.8 GSM253165 48h into an extended nightB GSE10016 Expression data of Arabidopsis thaliana rosettes in an extended night
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.08 2e-7 57 At5g14970 831349 unknown protein F:unknown;P:unknown;C:unknown;BOP C.G. S.X.
0.01 4e-2 40 At2g26450 817185 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMO C.G. S.X.
0.01 1e-1 38 At4g13130 826927 DC1 domain-containing protein F:protein binding, zinc ion binding;P:biological_process unknown;C:chloroplast envelope;PMO C.G. S.X.
0.02 1e-1 38 At4g19580 827700 heat shock protein binding F:heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAV C.G. S.X.
0.01 1e-1 38 At4g29060 829027 emb2726 (embryo defective 2726) F:RNA binding, translation elongation factor activity;P:embryonic development ending in seed dormancy, translational elongation, response to cadmium ion;C:chloroplast stroma, chloroplast, chloroplast envelope;BOMFPAV C.G. S.X.
0.01 1e-1 38 At4g31820 829311 ENP (ENHANCER OF PINOID) A member of the NPY family genes (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Encodes a protein with similarity to NHP3. Contains BTB/POZ domain. Promoter region has canonical auxin response element binding site and Wus binding site. Co-localizes to the late endosome with PID. Regulates cotyledon development through control of PIN1 polarity in concert with PID. Also involved in sepal and gynoecia development. C.G. S.X.
0.01 1e-1 38 At3g13940 820607 DNA binding / DNA-directed RNA polymerase F:DNA-directed RNA polymerase activity, DNA binding;P:transcription;C:nucleus;FMPOB C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 1e-8 61 Glycine max Gma.3095.1.S1_a_at CD399346 seed maturation protein PM23 - 1e-12 At2g14910 unknown protein C.G. S.X.
0.08 3e-7 56 Hordeum vulgare Contig6249_at Contig6249 - - 8e-7 At2g14910 unknown protein C.G. S.X.
0.08 1e-3 46 Oryza sativa Os03g0607500 AK059397.1 - Hypothetical protein 1e-3 At2g14910 unknown protein C.G. S.X.
0.16 9e-13 75 Populus trichocarpa PtpAffx.2019.3.S1_a_at CX177948 hypothetical protein - 5e-17 At2g14910 unknown protein C.G. S.X.
0.07 4e-5 50 Triticum aestivum TaAffx.116029.1.S1_at CA661492 - - 3e-5 At2g14910 unknown protein C.G. S.X.
0.15 1e-14 79 Vitis vinifera 1614118_at CD010339 - - 3e-17 At2g14910 unknown protein C.G. S.X.
0.09 4e-9 61 Zea mays Zm.5655.2.A1_a_at AY107995.1 hypothetical protein LOC100272896 - 4e-9 At2g14910 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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