CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g14100

Gene name CYP705A13

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At2g14100 815896 CYP705A13 a member of the cytochrome P450 family S.X. H.G.
0.89 94.6 At1g69810 843317 WRKY36 member of WRKY Transcription Factor; Group II-b S.X. H.G.
0.60 75.7 At3g20960 821646 CYP705A33 member of CYP705A S.X. H.G.
0.60 75.7 At5g17330 831599 GAD Encodes one of two isoforms of glutamate decarboxylase. S.X. H.G.
0.38 46.7 At4g21600 828246 ENDO5 (endonuclease 5) Encodes a protein with mismatch-specific endonuclease activity with a preference for T/G, A/G, and G/G of single base mismatches. It also has the ability to cleave indel types of mismatches (heteroduplexes with loops). S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
91.3 99.9 GSM184477 Lateral Root Cap root cells 2hr KCl control treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
64.2 99.8 GSM184480 Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
56.3 99.8 GSM133984 Birnbaum_1-14_StageIII-3_Rep3_ATH1 GSE5749 A gene expression map of the Arabidopsis root
55.4 99.8 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
54.7 99.8 GSM266671 Arabidopsis, root cells, cortex, -Fe, replicate 3 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment
43.5 99.8 GSM184483 Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
37.9 99.8 GSM205430 met1-3_leaf_fourth-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
37.7 99.7 GSM184909 Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt
34.7 99.7 GSM265431 Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2 GSE10497 Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
34.7 99.7 GSM184481 Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.85 0 1719 At3g32047 3769237 electron carrier/ heme binding / iron ion binding / monooxygenase F:electron carrier activity, monooxygenase activity, iron ion binding, heme binding;P:biological_process unknown;C:endomembrane system;MPFBOAV C.G. S.X.
0.52 3e-83 309 At3g20130 821556 CYP705A22 member of CYP705A C.G. S.X.
0.48 3e-83 309 At3g20120 821555 CYP705A21 member of CYP705A C.G. S.X.
0.66 2e-81 303 At3g20140 821557 CYP705A23 member of CYP705A C.G. S.X.
0.40 2e-78 293 At3g20090 821552 CYP705A18 member of CYP705A C.G. S.X.
0.42 4e-58 226 At4g15360 827202 CYP705A3 member of CYP705A C.G. S.X.
0.52 9e-53 208 At3g20950 821645 CYP705A32 member of CYP705A C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 7e-2 40 Glycine max GmaAffx.84302.1.S1_at AW101163 - - 2e-3 At4g15360 CYP705A3 C.G. S.X.
0.01 2e+0 34 Hordeum vulgare Contig12710_at Contig12710 - - 4e-5 At3g10405 unknown protein C.G. S.X.
0.03 3e-2 42 Oryza sativa OsAffx.18417.2.A1_at - - - 0 C.G. S.X.
0.03 2e-2 42 Populus trichocarpa PtpAffx.158865.1.S1_at CV276225 - - 1e-2 At2g14100 CYP705A13 C.G. S.X.
0.03 2e-4 48 Triticum aestivum Ta.8262.1.S1_at BQ161667 - - 4e-1 At4g13770 CYP83A1 (CYTOCHROME P450 83A1) C.G. S.X.
0.02 9e-1 34 Vitis vinifera 1611243_at CF206227.1 - - 3e-14 At5g24650 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein C.G. S.X.
0.02 5e+0 32 Zea mays Zm.5815.1.A1_at CF243741 - - 3e+0 At1g70949 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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