Gene omics information

Query gene ID At2g13620
Gene name ATCHX15
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5773.8At2g13620815847ATCHX15member of Putative Na+/H+ antiporter familyS.X.H.G.
0.6781.6At1g11250837666SYP125 (SYNTAXIN OF PLANTS 125)member of SYP12 Gene FamilyS.X.H.G.
0.6781.6At5g47470834797nodulin MtN21 family proteinF:unknown;P:unknown;C:membrane;BOPAMS.X.H.G.
0.6176.7At3g12160820393RABA4D (RAB GTPASE HOMOLOG A4D)Encodes RABA4D, a member of the Arabidopsis RabA4 subfamily of Rab GTPase proteins. It is transported in exocytic vesicles to the apical tip of pollen tubes where it appears to promote tip growth. Proper localization of RabA4d depends on ROP1, RIC3, and RIC4 activity.S.X.H.G.
0.5065.3At4g30770829200unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
374.8100.0GSM142740DH001_ATH1_A7-MPG1GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
262.5100.0GSM142736DH001_ATH1_A3-TCP1GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
211.7100.0GSM142739DH001_ATH1_A6-TCP2GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
136.699.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
123.499.9GSM239252Columbia glabrous (C24) wild type stamenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
120.499.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
118.199.9GSM154508Arabidopsis growing pollen tubes rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
116.699.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-346At2g28170817363ATCHX7member of Putative Na+/H+ antiporter familyC.G.S.X.
0.012e-242At1g08140837335ATCHX6A (CATION/H+ EXCHANGER 6A)member of Putative Na+/H+ antiporter familyC.G.S.X.
0.023e-138At2g31910817749ATCHX21 (CATION/H+ EXCHANGER 21)member of Putative Na+/H+ antiporter familyC.G.S.X.
0.011e+036At5g64260836547EXL2 (EXORDIUM LIKE 2)F:molecular_function unknown;P:biological_process unknown;C:cell wall, plant-type cell wall;PBC.G.S.X.
0.011e+036At5g19900832112PRLI-interacting factor, putativeF:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFPBVAC.G.S.X.
0.011e+036At5g04560830335DME (DEMETER)Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.C.G.S.X.
0.011e+036At4g00330828125CRCK2high overall homology to CRCK1C.G.S.X.
0.011e+036At4g23700828470ATCHX17 (CATION/H+ EXCHANGER 17)member of Putative Na+/H+ antiporter familyC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e+036Glycine maxGmaAffx.82556.1.S1_atBM094653--3e+0At4g31380FLP1 (FPF1-LIKE PROTEIN 1)C.G.S.X.
0.016e-136Hordeum vulgareContig9818_atContig9818--3e-6At4g08350GTA2 (GLOBAL TRANSCRIPTION FACTOR GROUP A2)C.G.S.X.
0.012e+036Oryza sativaOs05g02991009633.m02074-Hypothetical protein4e-3At3g25070RIN4 (RPM1 INTERACTING PROTEIN 4)C.G.S.X.
0.291e-22109Populus trichocarpaPtpAffx.207057.1.S1_atpmrna13986cation proton exchanger-1e-22At2g13620ATCHX15C.G.S.X.
0.021e+036Triticum aestivumTa.8019.1.A1_atBQ161134--2e+0At3g15690biotin carboxyl carrier protein of acetyl-CoA carboxylase-relatedC.G.S.X.
0.011e+034Vitis vinifera1617046_atCF512505hypothetical protein LOC100244517-2e-1At1g68160unknown proteinC.G.S.X.
0.012e+034Zea maysZmAffx.537.1.A1_atAI711809--3e+0At5g47610zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0006812The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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