Gene omics information

Query gene ID At2g13350
Gene name C2 domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7687.4At2g13350815821C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFS.X.H.G.
0.9195.6At2g23900816922glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOMAS.X.H.G.
0.8894.0At5g20410832163MGD2Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation.S.X.H.G.
0.8793.5At2g18470816362protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MOPBFVAS.X.H.G.
0.8693.1At2g31500817708CPK24member of Calcium Dependent Protein KinaseS.X.H.G.
0.8693.1At1g14420838004AT59F:lyase activity, pectate lyase activity;P:plant-type cell wall organization;C:endomembrane system;PBFOS.X.H.G.
0.8693.1At1g55560842005sks14 (SKU5 Similar 14)F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOAS.X.H.G.
0.8592.4At3g54800824645pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing proteinF:phosphoinositide binding;P:signal transduction;C:unknown;POMS.X.H.G.
0.8391.4At2g26410817181Iqd4 (IQ-domain 4)F:calmodulin binding;P:unknown;C:unknown;PMOBVFAS.X.H.G.
0.8190.4At4g36490829801SFH12 (SEC14-LIKE 12)F:phosphatidylinositol transporter activity, transporter activity;P:transport;C:unknown;MPFOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
175.6100.0E-ATMX-35-raw-cel-1574334864
172.5100.0E-ATMX-35-raw-cel-1574334880
169.1100.0GSM142740DH001_ATH1_A7-MPG1GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
135.999.9GSM239251Columbia glabrous (C24) wild type pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
135.799.9E-MEXP-1138-raw-cel-1432772938
135.099.9E-MEXP-1138-raw-cel-1432772970
127.799.9GSM154503Arabidopsis desiccated mature pollen grains rep1GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
127.499.9E-MEXP-1138-raw-cel-1432772906
122.399.9E-MEXP-285-raw-cel-440782791
120.499.9E-MEXP-285-raw-cel-440782725
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.046e-446At3g04360819591-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.012e-138At2g21550816694bifunctional dihydrofolate reductase-thymidylate synthase, putative / DHFR-TS, putativeF:thymidylate synthase activity, dihydrofolate reductase activity;P:glycine biosynthetic process, one-carbon compound metabolic process, nucleotide biosynthetic process, dTMP biosynthetic process;C:unknown;BOMFVPAC.G.S.X.
0.016e-136At4g03400827938DFL2 (DWARF IN LIGHT 2)Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation.C.G.S.X.
0.026e-136At1g22700838876tetratricopeptide repeat (TPR)-containing proteinEncodes a TPR protein with homology to Ycf37 from Synechocystis that is localized to the thylakoid membrane and is involved in photosystem I biogenesis.C.G.S.X.
0.012e+034At5g37160833689tRNA-splicing endonuclease positive effector-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFBOPAVC.G.S.X.
0.012e+034At5g45510834587leucine-rich repeat family proteinF:protein binding;P:unknown;C:cytosol;MOPBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e+034Glycine maxGmaAffx.61273.1.S1_atAW101401--3e-4At1g23740oxidoreductase, zinc-binding dehydrogenase family proteinC.G.S.X.
0.037e-238Hordeum vulgareEBem10_SQ001_D03_atEBem10_SQ001_D03--6e+0At5g06960OBF5 (OCS-ELEMENT BINDING FACTOR 5)C.G.S.X.
0.023e-138Oryza sativaOs07g0413632NM_188154.1--4e-1At4g01580transcriptional factor B3 family proteinC.G.S.X.
0.033e+034Populus trichocarpaPtpAffx.212147.1.S1_atpmrna23823hypothetical protein-9e-3At3g04360-C.G.S.X.
0.031e+132Triticum aestivumTaAffx.9566.1.S1_atCA594796--2e+0At4g09580-C.G.S.X.
0.027e-134Vitis vinifera1612008_atCF604996hypothetical protein LOC100243222-1e+0At4g08790nitrilase, putativeC.G.S.X.
0.024e+032Zea maysZm.9758.1.A1_atBM332963--4e+0At4g39190unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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