Gene omics information

Query gene ID At2g11910
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5368.6At2g11910815665unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast envelope;BMOFPVAS.X.H.G.
0.6176.7At5g02530831923RNA and export factor-binding protein, putativeF:nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MFOPBVAS.X.H.G.
0.4659.8At4g22140828303DNA binding / protein binding / zinc ion bindingF:protein binding, DNA binding, zinc ion binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;MPFOS.X.H.G.
0.2930.3At4g28440828961DNA-binding protein-relatedF:molecular_function unknown;P:biological_process unknown;C:unknown;PAOS.X.H.G.
0.2726.2At1g74560843797NRP1 (NAP1-RELATED PROTEIN 1)Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP2. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.S.X.H.G.
0.2115.8At1g09660837494KH domain-containing quaking protein, putativeF:RNA binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOS.X.H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.098.9GSM133942Weigel_2-34_CHIP-214-A_Rep1_ATH1GSE5746FRI FLC combos
7.598.8GSM311274Laser capture microdissected (LCM) embryo proper at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
7.298.8GSM131815Quick_A56_3-2hr_Rep3_ATH1GSE5638Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 3: Ambient CO2 and Low Light)
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.051e-344At3g07120819898zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MOFPVBAC.G.S.X.
0.044e-342At5g15140831366aldose 1-epimerase family proteinF:aldose 1-epimerase activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:endomembrane system;OBMFPVAC.G.S.X.
0.054e-342At5g23170832381protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.024e-342At4g17895827513UBP20 (UBIQUITIN-SPECIFIC PROTEASE 20)Encodes a ubiquitin-specific protease.C.G.S.X.
0.074e-342At3g50550824219unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOFPVAC.G.S.X.
0.044e-342At3g07260819914forkhead-associated domain-containing protein / FHA domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FMPOBC.G.S.X.
0.044e-342At2g21420816681zinc finger protein-relatedF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;BOMFPVAC.G.S.X.
0.022e-240At5g50310835096kelch repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVAC.G.S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.104e-756Glycine maxGmaAffx.48247.1.S1_atBM309527--3e-7At2g11910unknown proteinC.G.S.X.
0.041e-446Hordeum vulgareContig17012_atContig17012--2e+0At2g01275zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.041e-138Oryza sativaOsAffx.31410.1.S1_at---0C.G.S.X.
0.042e-240Populus trichocarpaPtp.5788.2.S1_atBU834689high mobility group family-2e-18At1g20696HMGB3 (HIGH MOBILITY GROUP B 3)C.G.S.X.
0.057e-238Triticum aestivumTaAffx.54099.2.S1_atCA685789--2e-2At2g19480NAP1C.G.S.X.
0.052e-238Vitis vinifera1608560_atCF405443hypothetical protein LOC100250989-3e+0At3g09890ankyrin repeat family proteinC.G.S.X.
0.044e-134Zea maysZm.2566.1.S1_atBM079352--6e-7At5g56950NAP1C.G.S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage