Gene omics information

Query gene ID At2g11810
Gene name MGDC
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g11810815657MGDCMGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions.S.X.H.G.
1.00100.0At1g08310837351esterase/lipase/thioesterase family proteinF:catalytic activity;P:biological_process unknown;C:unknown;BPOMFAS.X.H.G.
1.00100.0At1g17710838347phosphataseF:phosphatase activity;P:metabolic process;C:unknown;MPOBFS.X.H.G.
1.00100.0At2g45130819120SPX3 (SPX DOMAIN GENE 3)F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:cellular_component unknown;FMPOS.X.H.G.
0.9697.3At5g20790832202unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.8793.5At1g19200838503senescence-associated protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8391.4At1g73010843632phosphataseF:phosphatase activity;P:metabolic process;C:cellular_component unknown;MPOBFS.X.H.G.
0.8391.4At3g02040821175SRG3 (senescence-related gene 3)F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BMOFPAVS.X.H.G.
0.7989.1At3g05630819730PLDP2Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning.S.X.H.G.
0.7586.9At5g20150832137SPX1 (SPX DOMAIN GENE 1)F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:nucleus;FMPOBAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
308.0100.0GSM133957Fukuda_1-2_0B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
271.3100.0E-ATMX-31-raw-cel-1516947916
231.5100.0E-ATMX-31-raw-cel-1516947882
229.4100.0GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.
223.3100.0E-ATMX-31-raw-cel-1516947899
206.6100.0GSM142902WW001_ATH1_A1-WILLA-CONGSE6181Assembly of the cell wall pectic matrix.
164.399.9E-MEXP-1797-raw-cel-1669768057
160.599.9E-MEXP-1797-raw-cel-1669767985
156.699.9E-MEXP-1797-raw-cel-1669767949
149.099.9E-MEXP-1797-raw-cel-1669768003
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.406e-32139At5g20410832163MGD2Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation.C.G.S.X.
0.027e-136At5g66430836775S-adenosyl-L-methionine:carboxyl methyltransferase family proteinF:S-adenosyl-Lmethionine:benzoic acid acid carboxyl methyl transferase activity;P:biological_process unknown;C:cellular_component unknown;POBMFC.G.S.X.
0.017e-136At5g07660830659structural maintenance of chromosomes (SMC) family proteinF:protein binding, two-component sensor activity, ATP binding;P:signal transduction, chromosome segregation, chromosome organization;C:chromosome, nucleus, membrane;MOBFPAVC.G.S.X.
0.027e-136At5g48820834940ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE)Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization.C.G.S.X.
0.027e-136At4g05220825870harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.013e+034At5g43670834387transport protein, putativeF:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOPC.G.S.X.
0.013e+034At5g52920835369PKP-BETA1 (PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1)encodes a dominant chloroplast pyruvate kinase beta subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mutant plant has wrinkled seeds, with a 50-70% reduction in seed fatty acid content.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.107e-1789Glycine maxGma.11848.1.S1_atCD408549--4e-17At2g11810MGDCC.G.S.X.
0.166e-1271Hordeum vulgareContig12622_atContig12622--3e-10At5g20410MGD2C.G.S.X.
0.204e-757Oryza sativaOs02g0802700AB112060.1-MGDG synthase type A2e-7At2g11810MGDCC.G.S.X.
0.151e-1895Populus trichocarpaPtpAffx.26320.1.S1_atCV245887hypothetical protein-5e-19At2g11810MGDCC.G.S.X.
0.113e-1273Triticum aestivumTaAffx.38448.1.S1_atCA615012--3e-12At2g11810MGDCC.G.S.X.
0.023e+032Vitis vinifera1620954_atCF513203hypothetical protein LOC100242907-7e-2At4g04900RIC10 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 10)C.G.S.X.
0.186e-21101Zea maysZm.1968.1.A1_atCF244101MGD2-1e-20At2g11810MGDCC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006631The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
XGO:0016036A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of phosphate.
XGO:0019374The chemical reactions and pathways involving galactolipids, any glycolipid containing one of more residues of galactose and/or N-acetylgalactosamine.
SGO:0019375The chemical reactions and pathways resulting in the formation of galactolipids, any glycolipid containing one of more residues of galactose and/or N-acetylgalactosamine.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00044Link to KaPPA-View 4Glycolipid biosynthesis(prokaryotic pathway)
00359Link to KaPPA-View 4Glucosyltransferase
00425Link to KaPPA-View 4Glycolipid biosynthesis(eukaryotic pathway)



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00561Link to KEGG PATHWAYGlycerolipid metabolism
01100Link to KEGG PATHWAYMetabolic pathways
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