CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g10970

Gene name invertase/pectin methylesterase inhibitor family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.50 65.3 At2g10970 815562 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.60 75.7 At3g22650 821836 CEG (CEGENDUO) F:molecular_function unknown;P:response to auxin stimulus, lateral root formation;C:cellular_component unknown;PO S.X. H.G.
0.57 73.8 At1g43630 840947 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB S.X. H.G.
0.36 43.6 At2g45610 819169 hydrolase F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BPOFMAV S.X. H.G.
0.29 30.3 At1g16360 838205 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein F:unknown;P:biological_process unknown;C:membrane;MOFP S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
487.6 100.0 GSM142736 DH001_ATH1_A3-TCP1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
350.7 100.0 GSM205364 met1-3_leaf_second-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
310.9 100.0 GSM142739 DH001_ATH1_A6-TCP2 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
261.6 100.0 GSM142740 DH001_ATH1_A7-MPG1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
222.5 100.0 GSM239252 Columbia glabrous (C24) wild type stamen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
166.7 100.0 GSM205430 met1-3_leaf_fourth-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
162.5 99.9 GSM106916 opr3_JA_22 hrs_Rep2 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
160.2 99.9 GSM205432 Col_ leaf_ wildtype_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
130.6 99.9 GSM106915 opr3_JA_22 hrs_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
120.8 99.9 E-MEXP-1138-raw-cel-1432773290
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.04 2e-2 40 At1g35460 840438 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PM C.G. S.X.
0.03 3e-1 36 At5g15120 831364 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO C.G. S.X.
0.01 1e+0 34 At5g17920 831660 ATMS1 Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. C.G. S.X.
0.01 1e+0 34 At5g02250 830864 EMB2730 (EMBRYO DEFECTIVE 2730) Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis. C.G. S.X.
0.01 1e+0 34 At3g03780 821147 AtMS2 Encodes a cytosolic methionine synthase, involved in methionine regeneration via the activated methyl cycle (or SAM cycle) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e+0 34 Glycine max Gma.1368.1.S1_at BQ297707 - - 1e+0 At4g10820 F-box family protein C.G. S.X.
0.04 2e+0 32 Hordeum vulgare HT07I06u_at HT07I06u - - 6e-1 At4g04360 unknown protein C.G. S.X.
0.04 9e+0 32 Oryza sativa OsAffx.5055.1.S1_at - - - 0 C.G. S.X.
0.04 4e-1 36 Populus trichocarpa PtpAffx.223080.1.S1_at pmrna40889 hypothetical protein - 2e-1 At2g10970 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.04 1e+0 34 Triticum aestivum TaAffx.92860.1.A1_at BJ250478 - - 7e-8 At1g23330 unknown protein C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1615521_at CF209850 - - 1e+0 At1g16022 unknown protein C.G. S.X.
0.03 2e+0 32 Zea mays ZmAffx.1136.1.A1_at AW331220 - - 3e+0 At4g15460 glycine-rich protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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