Gene omics information

Query gene ID At2g07180
Gene name protein kinase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4253.9At2g07180815287protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.6277.3At4g20880827836ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2)F:unknown;P:unknown;C:nucleus;OMFBPVAS.X.H.G.
0.6277.3At4g26400828746zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:response to chitin;C:endomembrane system;PMOFVBS.X.H.G.
0.5873.8At4g20380827786zinc finger protein (LSD1)LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. contains zinc-finger motifs. LSD1 negatively regulates a basal defense pathway that can act upstream or independently of both NIM1/NPR1 function and SA accumulation following avirulent or virulent pathogen challengeS.X.H.G.
0.5773.8At3g57480824915zinc finger (C2H2 type, AN1-like) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:intracellular;MFOPS.X.H.G.
0.5773.8At5g58380835951SIP1 (SOS3-INTERACTING PROTEIN 1)Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase.S.X.H.G.
0.5368.6At2g46500819260phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family proteinF:inositol or phosphatidylinositol kinase activity, phosphotransferase activity, alcohol group as acceptor;P:protein modification process;C:cellular_component unknown;MPOFVBS.X.H.G.
0.5368.6At3g08730820020PK1 (PROTEIN-SERINE KINASE 1)Encodes a protein-serine kinase that phosphorylates ribosomal protein in vitro. Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Involved in translational up-regulation of ribosomal proteins. Phosphorylated by PDK1. Interacts with RAPTOR1, which in turn interacts with TOR. SPK6 activity is affected by osmotic stress, and plants overexpressing S6k1 are hypersensitive to osmotic stress. The gene is expressed in all tissues examined, with highest expression level detected in metabolically active tissues.S.X.H.G.
0.5166.3At4g20870827835FAH2 (FATTY ACID HYDROXYLASE 2)encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.S.X.H.G.
0.4862.5At5g61960836317AML1 (ARABIDOPSIS MEI2-LIKE PROTEIN 1)A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML1 is a member of two sister clades of mei2-like gene family, AML1 through AML5 and belongs to the clade named ALM14. AML1 is expressed during early embryo development, particularly along embryonic axis at torpedo stage, in shoot apex (weaker expression) and in the organogenic regions of floral apices.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
227.9100.0E-ATMX-35-raw-cel-1574334848
129.899.9E-ATMX-35-raw-cel-1574334880
123.999.9E-ATMX-35-raw-cel-1574334864
118.499.9E-MEXP-285-raw-cel-440782725
110.399.9E-ATMX-35-raw-cel-1574334816
105.699.9E-MEXP-285-raw-cel-440782791
103.099.9E-MEXP-1138-raw-cel-1432772714
96.899.9E-MEXP-1138-raw-cel-1432772650
93.099.9E-MEXP-1138-raw-cel-1432772522
90.499.9E-MEXP-1138-raw-cel-1432772586
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.063e-654At5g56460835747protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.053e-654At3g01300820989protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.034e-550At1g61590842455protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVAC.G.S.X.
0.057e-446At5g01020831918protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.067e-446At5g02290831880NAKEncodes a candidate protein kinase NAK that is similar to the oncogenes met and abl.C.G.S.X.
0.053e-344At1g76370843969protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast envelope;MPOBFVAC.G.S.X.
0.033e-344At1g72540843586protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVAC.G.S.X.
0.061e-242At3g55450824711protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.121e-656Glycine maxGmaAffx.8472.1.S1_atAW350979--2e-40At3g01300protein kinase, putativeC.G.S.X.
0.062e-859Hordeum vulgareContig11783_atContig11783--6e-36At3g01300protein kinase, putativeC.G.S.X.
0.116e-654Oryza sativaOs09g0361100AK064216.1-Protein kinase APK1A (EC 2.7.1.-)1e-70At5g15080protein kinase, putativeC.G.S.X.
0.403e-71270Populus trichocarpaPtpAffx.206209.1.S1_atpmrna12330hypothetical protein-3e-71At2g07180protein kinase, putativeC.G.S.X.
0.052e-138Triticum aestivumTaAffx.113753.1.S1_atCA605698--1e-1At2g07180protein kinase, putativeC.G.S.X.
0.032e-136Vitis vinifera1612974_atCF513889--3e-4At3g20890RNA binding / nucleic acid binding / nucleotide bindingC.G.S.X.
0.053e-136Zea maysZm.5300.1.A1_atAI734564--5e-9At5g01020protein kinase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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