Gene omics information

Query gene ID At2g06050
Gene name OPR3 (OPDA-REDUCTASE 3)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At2g06050815160OPR3 (OPDA-REDUCTASE 3)Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence.S.X.H.G.
0.7586.9At1g17420838314LOX3LipoxygenaseS.X.H.G.
0.6781.6At1g44350841026ILL6encodes a protein similar to IAA amino acid conjugate hydrolase.S.X.H.G.
0.5065.3At3g51450824308strictosidine synthase family proteinF:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endomembrane system;BPMOAFS.X.H.G.
0.5065.3At5g05600830443oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, iron ion binding;P:response to salt stress;C:unknown;POBFMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
57.199.8E-ATMX-19-raw-cel-1375547513
51.499.8GSM131132AtGen_B-18_2-4-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
49.499.8GSM131129AtGen_B-15_2-1-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
47.799.8GSM131147AtGen_B-33_3-5-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
46.999.8GSM131115AtGen_B-1_1-1-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
46.499.8GSM131131AtGen_B-17_2-3-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
45.799.8GSM131120AtGen_B-6_1-6-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
45.599.8GSM131134AtGen_B-20_2-6-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
45.499.8GSM131135AtGen_B-21_2-7-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
44.899.8GSM131121AtGen_B-7_1-7-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.074e-240At1g76690844002OPR2Encodes one of two closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer.C.G.S.X.
0.026e-136At4g08320826386tetratricopeptide repeat (TPR)-containing proteinF:binding;P:biological_process unknown;C:cellular_component unknown;OMBPFAC.G.S.X.
0.016e-136At3g01650819911RGLG1 (RING domain Ligase1)F:protein binding, zinc ion binding;P:N-terminal protein myristoylation, cytokinin metabolic process, auxin metabolic process;C:plasma membrane;MOPFBVAC.G.S.X.
0.056e-136At1g1802083838212-oxophytodienoate reductase, putativeF:unknown;P:unknown;C:unknown;BOFPAMC.G.S.X.
0.056e-136At1g1799083837912-oxophytodienoate reductase, putativeF:unknown;P:unknown;C:unknown;BOFPAMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.122e-448Glycine maxGmaAffx.93442.1.S1_atCF808146--6e-12At1g76680OPR1C.G.S.X.
0.057e-548Hordeum vulgareContig9556_atContig9556--2e-4At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.093e-757Oryza sativaOs08g0459600AK071203.1-12-oxophytodienoate reductase 3 (EC 1.3.1.42)2e-7At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.161e-21105Populus trichocarpaPtp.640.1.S1_s_atCX186020hypothetical protein-1e-21At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.052e-344Triticum aestivumTa.8433.2.S1_a_atCA645972--1e-3At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.057e-444Vitis vinifera1608502_atBQ794120hypothetical protein LOC100262732-1e-3At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.076e-238Zea maysZm.7548.1.A1_atBM07890312-oxo-phytodienoic acid reductase5-5e-11At1g76690OPR2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009620A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus.
XGO:0009695The chemical reactions and pathways resulting in the formation of jasmonic acid, a fatty acid derivative.
XGO:0010193A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ozone stimulus.
XGO:0009611A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00056Link to KaPPA-View 4Jasmonic acid biosynthesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00592Link to KEGG PATHWAYalpha-Linolenic acid metabolism
01070Link to KEGG PATHWAYBiosynthesis of plant hormones
01100Link to KEGG PATHWAYMetabolic pathways
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