CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g05910

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.50 65.3 At2g05910 815143 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB S.X. H.G.
0.86 93.1 At2g44260 819034 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PFMBO S.X. H.G.
0.86 93.1 At5g07680 830661 ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P S.X. H.G.
0.67 81.6 At1g70670 843404 caleosin-related family protein F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;PFO S.X. H.G.
0.40 50.8 At5g24950 832565 CYP71A15 putative cytochrome P450 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
156.1 99.9 GSM10451 WT Mature Green Seed 1 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
145.0 99.9 GSM10481 lec1-1 Mature Green Seed 1 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
131.9 99.9 GSM131702 ATGE_82_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
129.1 99.9 GSM131701 ATGE_82_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
117.9 99.9 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
117.0 99.9 GSM131700 ATGE_82_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
112.6 99.9 GSM131699 ATGE_81_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
112.0 99.9 GSM131703 ATGE_83_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
106.6 99.9 GSM10482 lec1-1 Mature Green Seed 2 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
102.9 99.9 GSM131698 ATGE_81_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.07 3e-7 56 At5g20640 832187 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:unknown;P C.G. S.X.
0.02 7e-2 38 At5g19680 832088 leucine-rich repeat family protein F:protein binding;P:biological_process unknown;C:cellular_component unknown;MBOPFVA C.G. S.X.
0.03 7e-2 38 At4g22470 828342 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;MBOPFVA C.G. S.X.
0.01 3e-1 36 At1g05640 837070 ankyrin repeat family protein F:protein binding;P:unknown;C:unknown;MOFBPVA C.G. S.X.
0.02 1e+0 34 At4g01730 826911 zinc ion binding F:zinc ion binding;P:biological_process unknown;C:unknown;MOFP C.G. S.X.
0.01 1e+0 34 At3g27020 822319 YSL6 (YELLOW STRIPE LIKE 6) Arabidopsis thaliana metal-nicotianamine transporter YSL6 C.G. S.X.
0.04 1e+0 34 At1g17345 838306 auxin-responsive protein-related F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;P C.G. S.X.
0.01 4e+0 32 At5g44690 834498 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVA C.G. S.X.
0.02 4e+0 32 At5g65380 836663 ripening-responsive protein, putative F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport, ripening;C:membrane;BPOFMA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 3e-5 50 Glycine max GmaAffx.1385.1.S1_at BE659199 - - 2e-5 At2g05910 unknown protein C.G. S.X.
0.04 1e-1 36 Hordeum vulgare HZ59C04r_at HZ59C04r - - 2e+0 At3g15111 unknown protein C.G. S.X.
0.04 9e+0 32 Oryza sativa OsAffx.4481.1.S1_at - - - 0 C.G. S.X.
0.12 3e-2 40 Populus trichocarpa PtpAffx.219698.1.S1_at pmrna35682 hypothetical protein - 2e-2 At2g05910 unknown protein C.G. S.X.
0.03 5e+0 32 Triticum aestivum TaAffx.85658.1.S1_at CA620781 - - 1e-3 At5g16130 40S ribosomal protein S7 (RPS7C) C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1622476_x_at CF204570.1 - - 5e+0 At4g21620 glycine-rich protein C.G. S.X.
0.03 2e+0 32 Zea mays Zm.16958.2.A1_a_at AW331652 hypothetical protein LOC100193269 - 8e-5 At5g16130 40S ribosomal protein S7 (RPS7C) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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