CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g04430

Gene name atnudt5 (Arabidopsis thaliana Nudix hydrolase homolog 5)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.13 5.8 At2g04430 814983 atnudt5 (Arabidopsis thaliana Nudix hydrolase homolog 5) F:hydrolase activity;P:unknown;C:cytosol;BOMPAFV S.X. H.G.
0.73 85.5 At4g00700 828031 C2 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF S.X. H.G.
0.29 30.3 At3g51440 824307 strictosidine synthase family protein F:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endoplasmic reticulum;BPMOFA S.X. H.G.
0.09 2.8 At5g58940 836011 CRCK1 (CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1) Arabidopsis thaliana calmodulin-binding receptor-like kinase mRNA S.X. H.G.
0.05 1.1 At4g26060 828712 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
136.9 99.9 GSM128662 Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
74.3 99.9 E-ATMX-27-raw-cel-1441080508
70.0 99.9 E-MEXP-739-raw-cel-1099467339
64.9 99.8 E-ATMX-27-raw-cel-1441080540
58.7 99.8 E-MEXP-739-raw-cel-1099467321
51.7 99.8 GSM226552 Slice10JW GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function
47.3 99.8 GSM226530 LCOLUMELLASB GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function
45.9 99.8 GSM244455 Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1 GSE9674 Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
44.8 99.8 E-MEXP-546-raw-cel-863289586
38.1 99.8 GSM134405 St.Clair_1-102_350_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1 GSE5755 Expression Level Polymorphism Project (ELP) - Tsu-1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.40 2e-61 236 At2g04450 814985 ATNUDT6 (Arabidopsis thaliana Nudix hydrolase homolog 6) F:ADP-ribose diphosphatase activity, hydrolase activity, NAD or NADH binding;P:response to other organism;C:cytosol;OBMPAFV C.G. S.X.
0.35 4e-57 222 At2g04440 814984 NUDIX/mutT hydrolase family protein F:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;PMOB C.G. S.X.
0.22 3e-14 79 At4g12720 826884 NUDT7 Encodes a protein with ADP-ribose hydrolase activity. Negatively regulates EDS1-conditioned plant defense and programmed cell death. C.G. S.X.
0.02 1e-1 38 At3g11900 820363 ANT1 (AROMATIC AND NEUTRAL TRANSPORTER 1) encodes an amino acid transporter that transports aromatic and neutral amino acids, IAA, and 2,4-D. Expressed in all tissues with highest abundance in flowers and cauline leaves. a member of a small gene family in Arabidopsis and represents a new class of amino acid transporters. C.G. S.X.
0.01 4e-1 36 At5g41240 834125 ATGSTT2 (GLUTATHIONE S-TRANSFERASE THETA 2) Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.01 4e-1 36 At5g41220 834124 ATGSTT3 (GLUTATHIONE S-TRANSFERASE THETA 3) Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.01 4e-1 36 At3g22080 821770 meprin and TRAF homology domain-containing protein / MATH domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOF C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 4e-5 50 Glycine max GmaAffx.77256.1.S1_at BU577239 - - 7e-8 At4g12720 NUDT7 C.G. S.X.
0.03 2e-1 36 Hordeum vulgare Contig9360_at Contig9360 - - 1e+0 At4g12720 NUDT7 C.G. S.X.
0.03 4e+0 34 Oryza sativa OsAffx.20896.1.S1_at - - - 0 C.G. S.X.
0.08 6e-1 36 Populus trichocarpa PtpAffx.203142.1.S1_at pmrna6227 hypothetical protein - 1e-7 At5g47650 ATNUDT2 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 2) C.G. S.X.
0.06 7e+0 32 Triticum aestivum TaAffx.85132.1.S1_at CA625331 - - 3e+0 At2g04430 atnudt5 (Arabidopsis thaliana Nudix hydrolase homolog 5) C.G. S.X.
0.03 5e-1 34 Vitis vinifera 1606755_at CD798651 hypothetical protein LOC100248417 - 1e-6 At2g30400 OFP2 (OVATE FAMILY PROTEIN 2) C.G. S.X.
0.02 3e+0 32 Zea mays Zm.3539.1.S1_at AW324635 - - 6e+0 At2g04430 atnudt5 (Arabidopsis thaliana Nudix hydrolase homolog 5) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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