Gene omics information

Query gene ID At2g04050
Gene name MATE efflux family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3846.7At2g04050814939MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAS.X.H.G.
0.8491.9At4g31950829325CYP82C3member of CYP82CS.X.H.G.
0.8290.9At1g10880837631unknown proteinF:unknown;P:unknown;C:cellular_component unknown;POMFBS.X.H.G.
0.8290.9At3g44560823581FAR8 (FATTY ACID REDUCTASE 8)F:oxidoreductase activity, acting on the CH-CH group of donors, fatty acyl-CoA reductase (alcohol-forming) activity;P:microsporogenesis, metabolic process;C:endomembrane system;MBOFPS.X.H.G.
0.7888.6At1g16420838212MC8 (METACASPASE 8)Encodes a metacaspase (cysteine-type endopeptidase) that is involved in promoting programmed cell death in response to hydrogen peroxide (H2O2), UV light, and methyl viologen (MV). Transcript levels rise in response to UV-C, H2O2, and MV. In vitro assays demonstrate that this enzyme has a preference for cleaving after an arginine residue, and it has a pH optimum of 8.0.S.X.H.G.
0.7888.6At3g54520824617unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMBS.X.H.G.
0.7083.5At3g28610822491ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAVS.X.H.G.
0.6781.6At4g15975827281protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:response to chitin;C:endomembrane system;MPFOVS.X.H.G.
0.5368.6At2g04070814943antiporter/ drug transporter/ transporterF:antiporter activity, drug transporter activity, transporter activity;P:transport, multidrug transport;C:membrane;BOPFMAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
572.5100.0GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
455.3100.0GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
409.8100.0GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
387.3100.0GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
277.3100.0GSM131329AtGen_6-3621_Saltstress-Roots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
161.699.9GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
138.799.9GSM131330AtGen_6-3622_Saltstress-Roots-24.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
79.699.9GSM131395AtGen_6-7311_UV-Bstress-Shoots-3.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)
78.399.9E-MEXP-711-raw-cel-1563002663
76.299.9GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
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Homologous genes



Paralogous genes



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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.9001735At2g04070814943antiporter/ drug transporter/ transporterF:antiporter activity, drug transporter activity, transporter activity;P:transport, multidrug transport;C:membrane;BOPFMAC.G.S.X.
0.8401489At2g04040814938TX1AtDTX1 (At2g04040) has been identified as a detoxifying efflux carrier for plant-derived antibiotics and other toxic compounds, including CD2+.C.G.S.X.
0.8801449At2g04080814944MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAC.G.S.X.
0.358e-121434At2g04066814942MATE efflux protein-relatedF:drug transporter activity, antiporter activity;P:multidrug transport;C:membrane;PBOFMC.G.S.X.
0.385e-42173At2g04100814946MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAC.G.S.X.
0.462e-32141At2g04090814945MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAC.G.S.X.
0.014e-240At2g01390814667pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:chloroplast;POMFABC.G.S.X.
0.024e-240At2g01360814664-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.034e-240At1g33100840206MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BPOFMAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e+132Glycine maxPsAffx.CL1398Contig1_atPsAffx.CL1398Contig1--1e+0At5g19510elongation factor 1B alpha-subunit 2 (eEF1Balpha2)C.G.S.X.
0.025e+032Hordeum vulgareHVSMEb0007K08r2_x_atHVSMEb0007K08r2--8e+0Atmg00210-C.G.S.X.
0.052e-861Oryza sativaOs.41694.1.S1_at---0C.G.S.X.
0.052e-242Populus trichocarpaPtpAffx.217529.1.S1_s_atpmrna32824hypothetical protein-3e-8At2g04080MATE efflux family proteinC.G.S.X.
0.027e-136Triticum aestivumTaAffx.5718.1.S1_atCA701119--1e+0At5g67060HEC1 (HECATE 1)C.G.S.X.
0.023e+032Vitis vinifera1617361_atCF404356hypothetical protein LOC100244017-3e-50At4g35630PSATC.G.S.X.
0.021e+034Zea maysZm.947.1.A1_atBF733123--2e-2At3g17180scpl33 (serine carboxypeptidase-like 33)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006855The directed movement of drugs across a membrane into, out of, within or between cells.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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