Gene omics information

Query gene ID At2g03800
Gene name GEK1 (GEKO1)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4457.2At2g03800814906GEK1 (GEKO1)encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype.S.X.H.G.
0.8089.8At2g44690819077ARAC9A member of ROP GTPase gene family.S.X.H.G.
0.7385.5At2g44450819052BGLU15 (BETA GLUCOSIDASE 15)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plant-type cell wall;BOPMFAS.X.H.G.
0.6781.6At1g44900841056ATP binding / DNA binding / DNA-dependent ATPaseF:DNA-dependent ATPase activity, DNA binding, ATP binding;P:DNA replication, DNA replication initiation;C:nucleus, chloroplast;MOBFPAVS.X.H.G.
0.5368.6At1g45180841086zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVBS.X.H.G.
0.5065.3At2g44830819092protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, nucleus;MOPFBVAS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
98.899.9GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-344At2g27040817246AGO4 (ARGONAUTE 4)AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.C.G.S.X.
0.015e-136At3g05660819733AtRLP33 (Receptor Like Protein 33)F:protein binding, kinase activity;P:signal transduction, defense response;C:chloroplast;PMOBFAVC.G.S.X.
0.022e+034At5g16870831550aminoacyl-tRNA hydrolaseF:aminoacyl-tRNA hydrolase activity;P:translation;C:unknown;OAMFPVBC.G.S.X.
0.012e+034At5g49660835028leucine-rich repeat transmembrane protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.012e+034At4g18160827541KCO6Encodes AtTPK3 (KCO6), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins.AtTPK3 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo.C.G.S.X.
0.022e+034At4g14860827143atofp11 (Arabidopsis thaliana ovate family protein 11)F:unknown;P:biological_process unknown;C:unknown;PC.G.S.X.
0.022e+034At3g16770820929ATEBP (ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN)Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3.C.G.S.X.
0.022e+034At3g01400821320armadillo/beta-catenin repeat family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MPOFBC.G.S.X.
0.012e+034At2g31260817683APG9 (autophagy 9)Involved in autophagy, the process of vacuolar bulk degradation of cytoplasmic components. Mutant shows accelerated bolting and senescence.C.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.101e-242Glycine maxGma.7220.1.A1_s_atAI495461--5e-3At2g03800GEK1 (GEKO1)C.G.S.X.
0.106e-548Hordeum vulgareContig8018_atContig8018--2e-4At2g03800GEK1 (GEKO1)C.G.S.X.
0.121e-965Oryza sativaOs.8949.1.S1_at---0C.G.S.X.
0.238e-1685Populus trichocarpaPtpAffx.212649.1.S1_atpmrna24753hypothetical protein-6e-16At2g03800GEK1 (GEKO1)C.G.S.X.
0.093e-550Triticum aestivumTaAffx.90052.1.S1_atBE216939--3e-5At2g03800GEK1 (GEKO1)C.G.S.X.
0.061e-136Vitis vinifera1609793_atBQ792585hypothetical protein LOC100245778-3e-1At2g03800GEK1 (GEKO1)C.G.S.X.
0.103e-652Zea maysZm.6401.2.S1_a_atBG266177hypothetical protein LOC100193788-1e-5At2g03800GEK1 (GEKO1)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009636A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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