CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g03750

Gene name sulfotransferase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At2g03750 814902 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:endomembrane system;MPOBF S.X. H.G.
0.67 81.6 At1g26220 839163 GCN5-related N-acetyltransferase (GNAT) family protein F:N-acetyltransferase activity;P:metabolic process;C:chloroplast;BOPA S.X. H.G.
0.61 76.7 At2g01590 814688 CRR3 (CHLORORESPIRATORY REDUCTION 3) Likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located in the membrane fraction of chloroplast. Mutant has impaired NAD(P)H dehydrogenase activity. S.X. H.G.
0.59 74.7 At1g67700 843095 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast, chloroplast envelope;PO S.X. H.G.
0.57 73.8 At3g61870 825360 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast, chloroplast inner membrane, chloroplast envelope;BOP S.X. H.G.
0.56 73.0 At4g27700 828884 rhodanese-like domain-containing protein F:molecular_function unknown;P:aging;C:chloroplast thylakoid membrane, chloroplast;BPOA S.X. H.G.
0.55 70.6 At1g19150 838498 LHCA6 PSI type II chlorophyll a/b-binding protein (Lhca2*1) mRNA, S.X. H.G.
0.55 70.6 At5g35790 833559 G6PD1 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 1) Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. S.X. H.G.
0.54 69.5 At4g21280 827877 oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ) Encodes the PsbQ subunit of the oxygen evolving complex of photosystem II. S.X. H.G.
0.54 69.5 At5g66190 836751 FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1) Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the thylakoid. The affinity of this enzyme for ferredoxin is slightly, but significantly, higher than AtLFNR2, an isoform of the same enzyme. AtLFNR1 forms a heterodimer with AtFNR2 and is also a prerequisite to attach AtFNR2 to the thylakoid membrane. S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.4 99.3 E-MEXP-791-raw-cel-1122937524
10.6 99.2 E-TABM-18-raw-cel-489542684
10.3 99.2 GSM142814 SS002_ATH1_A6-smith-12h GSE6174 Gene expression and carbohydrate metabolism through the diurnal cycle
9.6 99.1 GSM133035 CT482-1 GSE5684 AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
9.2 99.1 GSM253157 2h into an extended night GSE10016 Expression data of Arabidopsis thaliana rosettes in an extended night
9.1 99.1 GSM133828 Walters_A-07-Kruger-ML1_REP1 GSE5737 Carbohydrate- and redox-regulation of gene expression in a TPT mutant
8.4 99.0 E-MEXP-546-raw-cel-863289152
8.3 99.0 GSM131159 AtGen_C-9_3-C-24_REP3_ATH1 GSE5616 AtGenExpress: Response to Phytophthora infestans
8.2 99.0 GSM142803 SS001_ATH1_A6-Smith-8-45 GSE6174 Gene expression and carbohydrate metabolism through the diurnal cycle
8.1 98.9 E-MEXP-791-raw-cel-1122937542
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.09 2e-16 87 At1g13420 837902 ST4B (SULFOTRANSFERASE 4B) Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4B is expressed in the roots and transcript levels rise in response to cytokinin treatment. C.G. S.X.
0.08 4e-14 79 At1g13430 837903 ST4C (SULFOTRANSFERASE 4C) Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4C is expressed in the roots and transcript levels rise in response to cytokinin treatment. C.G. S.X.
0.10 6e-13 75 At2g14920 815981 ST4A (SULFOTRANSFERASE 4A) Encodes a brassinosteroid sulfotransferase that may be involved in brassinosteroid inactivation. In vitro experiements show that this enzyme can act on a broad group of naturally occurring brassinosteroids, including the 24-epimers and (22R,23R)-28 homobrassinosteroids, that have an array of different side chains, though it shows a preference for (22R,23R)-28 homobrassinosteroids. ST4A is expressed in the roots and transcript levels fall in response to cytokinin treatment. C.G. S.X.
0.09 9e-9 61 At1g28170 839711 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MOPBF C.G. S.X.
0.10 9e-6 52 At3g45070 823642 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MOPBF C.G. S.X.
0.08 4e-5 50 At3g45080 823643 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MOPBF C.G. S.X.
0.08 1e-4 48 At5g43690 834389 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MPOBF C.G. S.X.
0.04 8e-3 42 At3g51210 824284 flavonol 3-sulfotransferase-related F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;PM C.G. S.X.
0.07 3e-2 40 At4g26280 828734 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MPOBF C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-1 36 Glycine max GmaAffx.86770.1.S1_at AW598003 - - 5e-15 At1g45000 26S proteasome regulatory complex subunit p42D, putative C.G. S.X.
0.02 1e+0 34 Hordeum vulgare HA09l22r_at HA09l22r - - 7e-1 At5g26720 unknown protein C.G. S.X.
0.03 4e+0 34 Oryza sativa OsAffx.7397.1.S1_at - - - 0 C.G. S.X.
0.03 2e-4 48 Populus trichocarpa PtpAffx.224131.1.S1_at pmrna42378 hypothetical protein - 1e-4 At2g03750 sulfotransferase family protein C.G. S.X.
0.03 1e-1 38 Triticum aestivum Ta.29471.1.S1_at CA639407 - - 3e-1 At1g24240 ribosomal protein L19 family protein C.G. S.X.
0.04 2e-10 65 Vitis vinifera 1610983_at CB970564 hypothetical LOC100246453 - 3e-2 At1g18590 SOT17 (SULFOTRANSFERASE 17) C.G. S.X.
0.03 9e-1 34 Zea mays Zm.9522.1.A1_at BM269538 - - 1e+1 At3g11940 ATRPS5A (RIBOSOMAL PROTEIN 5A) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage