CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g03720

Gene name MRH6 (morphogenesis of root hair 6)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.84 91.9 At2g03720 814899 MRH6 (morphogenesis of root hair 6) Involved in root hair development S.X. H.G.
0.92 96.0 At4g25790 828684 allergen V5/Tpx-1-related family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBVA S.X. H.G.
0.92 96.0 At5g35190 833473 proline-rich extensin-like family protein F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFPOBVA S.X. H.G.
0.91 95.6 At5g22410 832302 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO S.X. H.G.
0.91 95.6 At4g25820 828687 XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9) Encodes a xyloglucan endotransglycosylase with a clear preference for non-fucosylated xyloglucan polymer. S.X. H.G.
0.90 95.1 At5g04960 830378 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMO S.X. H.G.
0.90 95.1 At5g05500 830433 pollen Ole e 1 allergen and extensin family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.90 95.1 At5g67400 836876 peroxidase 73 (PER73) (P73) (PRXR11) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO S.X. H.G.
0.89 94.6 At3g62680 825442 PRP3 (PROLINE-RICH PROTEIN 3) Proline-rich protein S.X. H.G.
0.89 94.6 At4g40090 830172 AGP3 (arabinogalactan-protein 3) F:unknown;P:multicellular organismal development;C:endomembrane system;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
327.8 100.0 GSM142751 MJ001_ATH1_A2-jones-WT2 GSE6165 The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
317.2 100.0 GSM142750 MJ001_ATH1_A1-jones-WT1 GSE6165 The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
233.4 100.0 GSM142754 MJ001_ATH1_A5-jones-WT-Rep3 GSE6165 The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
144.6 99.9 GSM226538 L8SB GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function
124.1 99.9 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
123.1 99.9 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
122.0 99.9 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
110.7 99.9 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
92.9 99.9 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
72.8 99.9 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.04 3e-4 46 At1g69080 843240 universal stress protein (USP) family protein F:molecular_function unknown;P:response to stress;C:unknown;PM C.G. S.X.
0.03 1e+0 34 At5g17390 831605 universal stress protein (USP) family protein F:molecular_function unknown;P:response to stress;C:unknown;MOPVFB C.G. S.X.
0.01 1e+0 34 At4g11530 826757 kinase F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.03 1e+0 34 At4g19920 827736 disease resistance protein (TIR class), putative F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane, chloroplast;PMVOBFA C.G. S.X.
0.04 1e+0 34 At3g03290 821301 universal stress protein (USP) family protein F:molecular_function unknown;P:response to stress;C:unknown;PMOF C.G. S.X.
0.02 1e+0 34 At2g17090 816214 SSP (SHORT SUSPENSOR) F:protein tyrosine kinase activity, binding, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:cellular_component unknown;PMOBVF C.G. S.X.
0.04 1e+0 34 At1g54630 841905 ACP3 (ACYL CARRIER PROTEIN 3) encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Gene expression is not regulated by light. C.G. S.X.
0.04 1e+0 34 At1g54580 841900 ACP2 (ACYL CARRIER PROTEIN 2) encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Gene expression is not regulated by light but downregulated by starvation and upregulated by increased level of exogenous sucrose. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 9e-2 38 Glycine max HgAffx.18934.1.S1_at CA940246 - - 6e-2 At2g03720 MRH6 (morphogenesis of root hair 6) C.G. S.X.
0.03 2e+0 32 Hordeum vulgare Contig15886_at Contig15886 - - 4e+0 At5g45020 - C.G. S.X.
0.06 1e-1 38 Oryza sativa OsAffx.28058.1.S1_at - - - 0 C.G. S.X.
0.09 2e-2 40 Populus trichocarpa PtpAffx.215752.1.S1_at pmrna30129 hypothetical protein - 2e-2 At2g03720 MRH6 (morphogenesis of root hair 6) C.G. S.X.
0.04 4e+0 32 Triticum aestivum TaAffx.82843.1.S1_at CA666140 - - 4e+0 At2g05520 GRP-3 (GLYCINE-RICH PROTEIN 3) C.G. S.X.
0.04 3e-1 34 Vitis vinifera 1607150_at CF415175 hypothetical protein LOC100251059 - 9e-1 At2g03720 MRH6 (morphogenesis of root hair 6) C.G. S.X.
0.03 2e+0 32 Zea mays Zm.9344.1.A1_at CK826773 - - 6e+0 At4g14010 RALFL32 (ralf-like 32) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0048765 The process whereby a relatively unspecialized cell acquires specialized features of a root hair cell.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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