Gene omics information

Query gene ID At2g03590
Gene name ATUPS1 (ARABIDOPSIS THALIANA UREIDE PERMEASE 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At2g03590814888ATUPS1 (ARABIDOPSIS THALIANA UREIDE PERMEASE 1)Encodes a member of a class of allantoin transporters.S.X.H.G.
0.5974.7At3g45310823669cysteine proteinase, putativeF:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPBVAFS.X.H.G.
0.5570.6At5g56260835725dimethylmenaquinone methyltransferase family proteinF:ribonuclease inhibitor activity;P:regulation of RNA metabolic process;C:cellular_component unknown;BOPAFMS.X.H.G.
0.5065.3At1g60090842304BGLU4 (BETA GLUCOSIDASE 4)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFAS.X.H.G.
0.4862.5At4g39500830104CYP96A11member of CYP96AS.X.H.G.
0.4862.5At2g24280816963serine carboxypeptidase S28 family proteinF:serine-type peptidase activity, serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system, lysosome;MOFPBS.X.H.G.
0.4558.3At5g42890834300SCP2 (STEROL CARRIER PROTEIN 2)F:sterol carrier activity, oxidoreductase activity;P:glyoxylate metabolic process, intracellular lipid transport, fatty acid beta-oxidation, seed germination;C:peroxisome;MFOPBS.X.H.G.
0.4457.2At3g06860819870MFP2 (MULTIFUNCTIONAL PROTEIN 2)Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.S.X.H.G.
0.4050.8At2g22780816808PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1)encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.S.X.H.G.
0.3541.6At5g27410832800aminotransferase class IV family proteinF:catalytic activity;P:metabolic process;C:cellular_component unknown;OBPAFMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
131.699.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
124.999.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
120.199.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
118.499.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
113.799.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
107.399.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
106.399.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
104.399.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
103.899.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
101.999.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.710803At2g03600814889ATUPS3 (Arabidopsis thaliana ureide permease 3)hypothetical protein, similar to ATUPS1, an allantoin transporter.C.G.S.X.
0.586e-44178At2g03530814882UPS2 (UREIDE PERMEASE 2)Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport.C.G.S.X.
0.217e-1995At1g26440839185ATUPS5 (ARABIDOPSIS THALIANA UREIDE PERMEASE 5)uptake assays in a yeast mutant indicated this splice variant is not a cellular importer for allantoin, uracil or xanthineC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-1067Glycine maxGma.10847.2.S1_atBE800382--4e-10At1g26440ATUPS5 (ARABIDOPSIS THALIANA UREIDE PERMEASE 5)C.G.S.X.
0.105e-1581Hordeum vulgareContig6708_atContig6708--2e-14At2g03590ATUPS1 (ARABIDOPSIS THALIANA UREIDE PERMEASE 1)C.G.S.X.
0.132e-20101Oryza sativaOs12g0502800AK058620.1-Allantoin permease2e-20At2g03590ATUPS1 (ARABIDOPSIS THALIANA UREIDE PERMEASE 1)C.G.S.X.
0.372e-32141Populus trichocarpaPtpAffx.207894.1.S1_s_atpmrna15672hypothetical protein-1e-32At2g03590ATUPS1 (ARABIDOPSIS THALIANA UREIDE PERMEASE 1)C.G.S.X.
0.084e-1479Triticum aestivumTa.15026.1.S1_atBJ287051--2e-14At2g03590ATUPS1 (ARABIDOPSIS THALIANA UREIDE PERMEASE 1)C.G.S.X.
0.023e+032Vitis vinifera1618300_atCF606877hypothetical protein LOC100264012-8e-23At2g34450high mobility group (HMG1/2) family proteinC.G.S.X.
0.023e-756Zea maysZm.11589.1.S1_atBM379169hypothetical protein LOC100280038-8e-7At2g03590ATUPS1 (ARABIDOPSIS THALIANA UREIDE PERMEASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0015720The directed movement of allantoin, (2,5-dioxo-4-imidazolidinyl)urea, into, out of, within or between cells.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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