CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g02860

Gene name SUT2 (SUCROSE TRANSPORTER 2)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At2g02860 814817 SUT2 (SUCROSE TRANSPORTER 2) encodes a sucrose transporter in sieve elements and a number of sink tissues and cell types. Gene expression is induced by wounding. S.X. H.G.
0.33 38.1 At2g02730 814802 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.29 30.3 At5g15640 831418 mitochondrial substrate carrier family protein F:binding;P:transport, mitochondrial transport;C:mitochondrion, mitochondrial inner membrane;MFPO S.X. H.G.
0.02 0.4 At5g44240 834447 haloacid dehalogenase-like hydrolase family protein F:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, phospholipid transport, ATP biosynthetic process;C:integral to membrane, membrane;MBOFPAV S.X. H.G.
0.01 0.2 At1g51710 841596 UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6) Ubiquitin-specific protease 6 (UBP6). Deubiquinating enzyme. Interacts with calmodulin. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
88.3 99.9 GSM142904 WW002_ATH1_A1-willa-CON-REP2 GSE6181 Assembly of the cell wall pectic matrix.
87.9 99.9 GSM142902 WW001_ATH1_A1-WILLA-CON GSE6181 Assembly of the cell wall pectic matrix.
72.2 99.9 GSM133810 Diamond_A-3-Diamo-fum_SLD GSE5735 Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
68.1 99.9 GSM134208 Murray_3-4_D7-GROWTH_Rep1_ATH1 GSE5750 Growth of suspension-cultured cells
63.8 99.8 GSM133945 Murray_2-1_T0-APH_Rep1_ATH1 GSE5747 Genome-wide cell cycle studies
63.6 99.8 GSM133950 Murray_2-6_T10-APH_Rep1_ATH1 GSE5747 Genome-wide cell cycle studies
59.8 99.8 GSM133811 Diamond_A-4-Diamo-fum_SLD GSE5735 Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
58.6 99.8 GSM133813 Diamond_A-2-Diamo-met_SLD GSE5735 Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
57.9 99.8 GSM133947 Murray_2-3_T4-APH_Rep1_ATH1 GSE5747 Genome-wide cell cycle studies
53.5 99.8 GSM133809 Diamond_A-2-Diamo-fum_SLD GSE5735 Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.01 6e-2 40 At1g53440 841779 leucine-rich repeat family protein / protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA C.G. S.X.
0.01 6e-2 40 At1g53430 841778 leucine-rich repeat family protein / protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA C.G. S.X.
0.01 2e-1 38 At3g05240 819688 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:cellular_component unknown;POFMB C.G. S.X.
0.03 2e-1 38 At1g09960 837530 SUT4 (SUCROSE TRANSPORTER 4) low affinity (10mM) sucrose transporter in sieve elements (phloem) C.G. S.X.
0.01 9e-1 36 At5g58270 835939 STA1 (STARIK 1) Encodes a mitochondrial half-molecule ABC transporter, a member of ATM subfamily. Mutants are dwarfed, chlorotic plants with altered leaf morphology. ATM3 transcription is induced by Cd(II) or Pb(II). Involved in heavy metal resistance. C.G. S.X.
0.01 9e-1 36 At2g23520 816884 catalytic/ pyridoxal phosphate binding F:pyridoxal phosphate binding, catalytic activity;P:biological_process unknown;C:plasma membrane;PMFOBA C.G. S.X.
0.01 9e-1 36 At1g06910 837201 TRFL7 (TRF-LIKE 7) Arabidopsis thaliana myb family transcription factor (At1g06910) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 1e-3 46 Glycine max GmaAffx.74113.1.S1_at BQ452560 - - 2e-4 At2g02860 SUT2 (SUCROSE TRANSPORTER 2) C.G. S.X.
0.11 1e-22 107 Hordeum vulgare Contig7830_s_at Contig7830 - - 3e-22 At2g02860 SUT2 (SUCROSE TRANSPORTER 2) C.G. S.X.
0.16 2e-18 95 Oryza sativa Os02g0827200 AB091673.1 - Sucrose transporter 1e-18 At2g02860 SUT2 (SUCROSE TRANSPORTER 2) C.G. S.X.
0.46 3e-66 254 Populus trichocarpa PtpAffx.208134.1.S1_x_at pmrna16163 sucrose proton symporter - 2e-66 At2g02860 SUT2 (SUCROSE TRANSPORTER 2) C.G. S.X.
0.06 4e-3 44 Triticum aestivum Ta.30566.1.S1_at CK205443 - - 1e-3 At2g02860 SUT2 (SUCROSE TRANSPORTER 2) C.G. S.X.
0.25 2e-79 295 Vitis vinifera 1622221_at AF021809.1 sucrose transporter-like - 7e-79 At2g02860 SUT2 (SUCROSE TRANSPORTER 2) C.G. S.X.
0.17 8e-27 121 Zea mays Zm.8220.1.S1_at AY581895.1 hypothetical protein LOC100280251 - 2e-26 At2g02860 SUT2 (SUCROSE TRANSPORTER 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009611 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
S GO:0015770 The directed movement of sucrose into, out of, within or between cells. Sucrose is the disaccharide fructofuranosyl-glucopyranoside.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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