CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g02850

Gene name ARPN (PLANTACYANIN)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At2g02850 814816 ARPN (PLANTACYANIN) Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil. S.X. H.G.
0.33 38.1 At1g68220 843151 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P S.X. H.G.
0.25 22.6 At5g49990 835063 xanthine/uracil permease family protein F:transmembrane transporter activity;P:transport;C:membrane;BOMPFAV S.X. H.G.
0.02 0.4 At2g36350 818208 protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MOPFBVA S.X. H.G.
0.02 0.4 At3g20120 821555 CYP705A21 member of CYP705A S.X. H.G.
0.00 0.0 At1g06010 837110 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
76.2 99.9 E-MEXP-1474-raw-cel-1593932833
74.5 99.9 GSM67086 Arabidopsis_Stigma02 GSE3056 Arabidopsis Pollination Study
73.9 99.9 E-MEXP-1246-raw-cel-1504120231
66.2 99.8 E-MEXP-1246-raw-cel-1504120201
58.6 99.8 GSM226542 L12SB GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function
54.1 99.8 GSM131596 ATGE_37_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
53.8 99.8 E-MEXP-1246-raw-cel-1504120171
53.8 99.8 GSM62699 arf6/arf6 ARF8/arf8 flowers_stage 11-12 GSE2848 Auxin Response Factor mediated flower gene expression
53.4 99.8 E-MEXP-1474-raw-cel-1593932545
51.6 99.8 GSM133304 RIKEN-NAKABAYASHI1B GSE5700 AtGenExpress: Effect of ABA during seed imbibition
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.01 7e-1 34 At1g10050 837540 glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein Encodes a putative glycosyl hydrolase family 10 protein (xylanase). C.G. S.X.
0.01 3e+0 32 At4g11490 826754 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.02 3e+0 32 At3g53690 824536 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MFOP C.G. S.X.
0.04 3e+0 32 At2g37300 818307 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OFPMB C.G. S.X.
0.02 3e+0 32 At1g79340 844272 AtMC4 (metacaspase 4) F:cysteine-type peptidase activity;P:proteolysis;C:plasma membrane;BOFPAM C.G. S.X.
0.01 3e+0 32 At1g13160 837874 SDA1 family protein F:binding;P:biological_process unknown;C:cellular_component unknown;BMOFPVA C.G. S.X.
0.01 1e+1 30 At5g06680 830557 SPC98 (SPINDLE POLE BODY COMPONENT 98) Encodes protein similar to yeast SCP98. Yeast SCP98 is essential for the microtubule nucleation activity of the gamma-tubulin ring complexes. C.G. S.X.
0.01 1e+1 30 At5g57480 835852 AAA-type ATPase family protein F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 1e+0 34 Glycine max Gma.7436.1.S1_at BU547698 - - 1e+0 At2g02850 ARPN (PLANTACYANIN) C.G. S.X.
0.10 1e-4 46 Hordeum vulgare Contig77_s_at Contig77 - - 3e-4 At2g02850 ARPN (PLANTACYANIN) C.G. S.X.
0.05 2e+0 34 Oryza sativa OsAffx.12477.1.A1_at - - - 0 C.G. S.X.
0.10 3e-1 36 Populus trichocarpa PtpAffx.114272.1.A1_at CV232272 - - 4e-1 At2g02850 ARPN (PLANTACYANIN) C.G. S.X.
0.09 1e-2 40 Triticum aestivum Ta.27992.1.S1_s_at CD885652 - - 2e-2 At2g02850 ARPN (PLANTACYANIN) C.G. S.X.
0.07 9e-1 32 Vitis vinifera 1607270_at CB923224 hypothetical protein LOC100248011 - 5e+0 At3g58510 DEAD box RNA helicase, putative (RH11) C.G. S.X.
0.03 3e-1 34 Zea mays Zm.4727.1.S1_at AI738206 hypothetical protein LOC100273187 - 5e+0 At5g33390 glycine-rich protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009856 The cascade of biological processes occurring in plants beginning when the pollen lands on the stigma and continuing up to, but not including, fertilization, as defined by sperm-central cell fusion.
X GO:0048653 The process whose specific outcome is the progression of the anther over time, from its formation to the mature structure.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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