Gene omics information

Query gene ID At2g02850
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g02850814816ARPN (PLANTACYANIN)Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.S.X.H.G.
0.3338.1At1g68220843151unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PS.X.H.G.
0.2522.6At5g49990835063xanthine/uracil permease family proteinF:transmembrane transporter activity;P:transport;C:membrane;BOMPFAVS.X.H.G.
0.020.4At2g36350818208protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MOPFBVAS.X.H.G.
0.020.4At3g20120821555CYP705A21member of CYP705AS.X.H.G.
0.000.0At1g06010837110unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
74.599.9GSM67086Arabidopsis_Stigma02GSE3056Arabidopsis Pollination Study
58.699.8GSM226542L12SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
54.199.8GSM131596ATGE_37_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
53.899.8GSM62699arf6/arf6 ARF8/arf8 flowers_stage 11-12GSE2848Auxin Response Factor mediated flower gene expression
51.699.8GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.017e-134At1g10050837540glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing proteinEncodes a putative glycosyl hydrolase family 10 protein (xylanase).C.G.S.X.
0.013e+032At4g11490826754protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.023e+032At3g53690824536zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MFOPC.G.S.X.
0.043e+032At2g37300818307unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OFPMBC.G.S.X.
0.023e+032At1g79340844272AtMC4 (metacaspase 4)F:cysteine-type peptidase activity;P:proteolysis;C:plasma membrane;BOFPAMC.G.S.X.
0.013e+032At1g13160837874SDA1 family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;BMOFPVAC.G.S.X.
0.011e+130At5g06680830557SPC98 (SPINDLE POLE BODY COMPONENT 98)Encodes protein similar to yeast SCP98. Yeast SCP98 is essential for the microtubule nucleation activity of the gamma-tubulin ring complexes.C.G.S.X.
0.011e+130At5g57480835852AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAVC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.081e+034Glycine maxGma.7436.1.S1_atBU547698--1e+0At2g02850ARPN (PLANTACYANIN)C.G.S.X.
0.101e-446Hordeum vulgareContig77_s_atContig77--3e-4At2g02850ARPN (PLANTACYANIN)C.G.S.X.
0.052e+034Oryza sativaOsAffx.12477.1.A1_at---0C.G.S.X.
0.103e-136Populus trichocarpaPtpAffx.114272.1.A1_atCV232272--4e-1At2g02850ARPN (PLANTACYANIN)C.G.S.X.
0.091e-240Triticum aestivumTa.27992.1.S1_s_atCD885652--2e-2At2g02850ARPN (PLANTACYANIN)C.G.S.X.
0.079e-132Vitis vinifera1607270_atCB923224hypothetical protein LOC100248011-5e+0At3g58510DEAD box RNA helicase, putative (RH11)C.G.S.X.
0.033e-134Zea maysZm.4727.1.S1_atAI738206hypothetical protein LOC100273187-5e+0At5g33390glycine-rich proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009856The cascade of biological processes occurring in plants beginning when the pollen lands on the stigma and continuing up to, but not including, fertilization, as defined by sperm-central cell fusion.
XGO:0048653The process whose specific outcome is the progression of the anther over time, from its formation to the mature structure.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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